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sw_6_scaffold_650_5

Organism: SW_6_Salinibacter_ruber_63_39

partial RP 8 / 55 MC: 1 BSCG 9 / 51 ASCG 6 / 38
Location: comp(5198..5782)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H540_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 166
  • Evalue 3.40e-38
rpoE; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 166
  • Evalue 9.60e-39
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH23145.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 166
  • Evalue 4.80e-38

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
GTGTCGCTCACGGTGATCGACGGTTACGACGCCCTTGCCGATTTCATGGACGATCGGTTCGATACCTGGAGCCGAAAACTCTGGGCTTCCGACCGGGAGGCCTTCGCCGACCTGTTCGACGCGATGCACACGCCTCTGCTCCGCTACGCCGCCCGCCTGACGACTGAGGAGGCCGCCTACGACGTGGTGCAGGAGGCGTTCGTATCCCTCTGGCGCATGCGGGCGTCCCTCGATCCTGACCGGTCGCTCAAGTCGCTGCTCTACACCCTCGTTCGCAACGAAGCGCTCAACCAGCGCCGCGCCATGCGCCGCCGTCAGGACCGTCACACCGAATATTCGCCGAGCCGGCAGCCGTCCCCCTCGGACGAGGTGGACTCCGACGCCCTCCGCACCCGGATGCGAGCGTGGATCGATGACCTGCCGGAGCGGCAACGCGAGGCCTTTCGGCTCAGCCGGTTTGACGACCTCACGCACGACGAGATTGCCGACGTGATGGACATTGCACCGCGAACGGTGACCAACCACGTGACGAAGGCCCTGCAGACCCTGCGGGACCGCCTCGACGACCACCGGTCGACGAACTAG
PROTEIN sequence
Length: 195
VSLTVIDGYDALADFMDDRFDTWSRKLWASDREAFADLFDAMHTPLLRYAARLTTEEAAYDVVQEAFVSLWRMRASLDPDRSLKSLLYTLVRNEALNQRRAMRRRQDRHTEYSPSRQPSPSDEVDSDALRTRMRAWIDDLPERQREAFRLSRFDDLTHDEIADVMDIAPRTVTNHVTKALQTLRDRLDDHRSTN*