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sw_6_scaffold_14810_1

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 2..1153

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003773C5E similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 405.0
  • Bit_score: 386
  • Evalue 2.40e-104
type II and III secretion system protein; K12282 MSHA biogenesis protein MshL Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 401.0
  • Bit_score: 405
  • Evalue 7.10e-110
mshL; type IV pilus secretin MshL similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 395.0
  • Bit_score: 370
  • Evalue 5.10e-100

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Taxonomy

RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
CTCATGCCCGACGAGCAAGAGCCCGATCTGCCCGCCGAGCTGGCCGAGACCCGTTTCGATATCAATGTCGATAACGCGCCGGCACGGGCGTTCTTCATGGGCCTGGTCGACGGCACGCCGTACAACATGGTCGTCCATCCCGATGTCGAGGGCACCATCAGCCTGGAGCTCAAGGACGTGACCGTGCCCGACGTGATGCAGATCGCACGCCGGGTCTACGGCTACGAATACGAGCAGCGCGATACGGGCTACATCGTCATGCCGGCGCGCATGCAATCACGCATCTTCCACGTCGACTATCTCGACATCGAGCGCGGTGGCCAATCCAATATGCGCGTGAGCTCGGGCCAGGTCAGCGAGGTTGGCAGCGGCGACGGCGGCGATAGCGGCTCGAGTAGCGCTAGCGTGCAGAATAATCCCGGCAGCCGCATCACCACCCAATCGAGCTCGGAGTTTTGGCAGGGATTGGAGCAAACGGTGACCTCGATCATCGGCGATGGCCCCGACCGCAGTGTCGTCGTCGATTCCGAGGCCAGTCTGATCGTCGTGCGCGCGATGCCGGGCGAGCTGCGCGAGGTCAAAGACTACCTGGCCGCCGCGCAAAAGAACCTGCAACGCCAGGTGATCCTCGAGGCCAAGGTGCTCGAGGTGCGCCTGTCGGACGCCAACCAGACGGGCATCAACTGGCAGGCGCTGGCCCAAGGCGGTAGCGACGAATACGCCGTGGGCCAGTCGGCGATCAATACGGGCGATACCGCCACACCCGACAACCCCATCGCTGACCTGCTGTCGCCGTCGCAGGCGACCGGGAATCTCGATTTCGGGGGGCTTTTCTCGATCGGCGCCGACACCACCGACTTCAATGCCCTGATCCGCCTGCTCAATACCCAGGGCGATGTCCAAGTCTTGTCGAGCCCGCGGGTGTCGACGCTCAACAACCAGAAGGCGGTGATCAAGGTCGGCAGCGACGAATTCTTCGTCACCGACGTCGAGTCCGATCAGGATACGGGCTCGACGACCAGCGGTAGCACGGTCTCCACCGATATCGAGCTCACCCCCTTCTTCTCGGGCATCGCGCTCGACGTGATGCCCCAGATCGGTGAGAACGGCGAGGTGACCTTGCACGTTCACCCCACCGTCAGCGAGGTCCAG
PROTEIN sequence
Length: 384
LMPDEQEPDLPAELAETRFDINVDNAPARAFFMGLVDGTPYNMVVHPDVEGTISLELKDVTVPDVMQIARRVYGYEYEQRDTGYIVMPARMQSRIFHVDYLDIERGGQSNMRVSSGQVSEVGSGDGGDSGSSSASVQNNPGSRITTQSSSEFWQGLEQTVTSIIGDGPDRSVVVDSEASLIVVRAMPGELREVKDYLAAAQKNLQRQVILEAKVLEVRLSDANQTGINWQALAQGGSDEYAVGQSAINTGDTATPDNPIADLLSPSQATGNLDFGGLFSIGADTTDFNALIRLLNTQGDVQVLSSPRVSTLNNQKAVIKVGSDEFFVTDVESDQDTGSTTSGSTVSTDIELTPFFSGIALDVMPQIGENGEVTLHVHPTVSEVQ