ggKbase home page

sw_6_scaffold_20953_2

Organism: SW_6_Gammaproteobacteria_67_9

partial RP 42 / 55 BSCG 38 / 51 MC: 2 ASCG 5 / 38 MC: 2
Location: 327..1700

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 382.0
  • Bit_score: 528
  • Evalue 8.60e-147
phosphomethylpyrimidine synthase ThiC n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289BA3C similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 457.0
  • Bit_score: 649
  • Evalue 2.40e-183
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 291.0
  • Bit_score: 522
  • Evalue 9.50e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Psychrobacter sp. JCM 18902 → Psychrobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGGACGAGCGCGAGCGTAACGAACAGGGTCGATATACCGAGACGATCACGCCCGAGCTCGTGCGTGCCGAGGTCGCCGCAGGCCGGGCCATCATCCCGGCGAACGTCAACCACCCCGAGCTCGAGCCCATGATCATCGGGCGTAACTTCCGCACCAAGGTCAACGCCAACATCGGCAATTCGGCGGTGACTTCGTCGGTCGTCGAGGAGGTCGAGAAGATGGTGTGGTCGGCGCGTTGGGGCGGCGACACCATCATGGATCTGTCGACGGGCAAGCACATCCACGAGACGCGCGAGTGGATCCTGCGCAACGCGCCGGTGCCGGTGGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTCGGGCGCCCCGAGGATCTCACTTGGGAACTGTTCCGCGACACGCTCATCGAGCAGGCCGAGCAGGGCGTGGATTACTTCACCCTCCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATACGCTGATCGAGCAGGCCGAGCAGGGCGTGGACTACTTCACCATCCACGCCGGCGTCCGCCTGCCCCACATCCCGCTGACCACCGACCGCGTCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCCCATCACAGCGAGAGCTTCCTCTACACCCACTTCCGCGAGATCTGCCGCATCATGGCCGCCTACGATGTATCGCTCTCGCTCGGCGACGGCCTGCGCCCCGGCTCGATCGCCGACGCCAACGACCGCGCCCAGTTCGCCGAGCTCGAGACCCTGGGCGAGCTCACCCGGATCGCCTGGGAGCACGACGTCCAGGTCATGATCGAGGGTCCGGGCCATGTGCCCATGCAGCTCATCAAGGACAACATGGACCGCGAGCTCGCCGCGTGCCTCGAGGCGCCGTTCTACACCCTGGGCCCGCTGACCACCGACATCGCGCCCGGTTACGACCACATCACCAGCGCCATCGGTGCGGCCCAGATCGGCTGGTACGGCTGCGCCATGCTTTGTTACGTCACCCCCAAGGAGCACTTGGGGCTGCCCAACCGCGACGACGTGCGCGCGGGCCTGGTCGCCTACCGCATCGCCGCGCACGCGGCCGACTTGGCCAAGGGCCACCCGGCCGCCCAGATGCGCGACAACGCCTTGTCCAAGGCGCGCTTCGAATTCCGTTGGCAAGACCAGTTCAACCTGGGGCTCGACCCCGAGCGCGCGCGGCAATACCACGACGAGACCCTGCCGCAGGAGGGCGCCAAGACGGCCCATTTTTGCTCGATGTGCGGGCCCAAGTTCTGCTCGATGGCGATCAGCCACGAGCTGCGCGAATACGCCGACGCGCTGGGCCAGGACGTCGACACCGCGGCC
PROTEIN sequence
Length: 458
MDERERNEQGRYTETITPELVRAEVAAGRAIIPANVNHPELEPMIIGRNFRTKVNANIGNSAVTSSVVEEVEKMVWSARWGGDTIMDLSTGKHIHETREWILRNAPVPVGTVPIYQALEKVGRPEDLTWELFRDTLIEQAEQGVDYFTLHXXXXXXXXXXXXDTLIEQAEQGVDYFTIHAGVRLPHIPLTTDRVTGIVSRGGSIMAKWCLAHHSESFLYTHFREICRIMAAYDVSLSLGDGLRPGSIADANDRAQFAELETLGELTRIAWEHDVQVMIEGPGHVPMQLIKDNMDRELAACLEAPFYTLGPLTTDIAPGYDHITSAIGAAQIGWYGCAMLCYVTPKEHLGLPNRDDVRAGLVAYRIAAHAADLAKGHPAAQMRDNALSKARFEFRWQDQFNLGLDPERARQYHDETLPQEGAKTAHFCSMCGPKFCSMAISHELREYADALGQDVDTAA