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sw_7_scaffold_1480_5

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(4341..5513)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JDI1_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 408.0
  • Bit_score: 440
  • Evalue 2.40e-120
sigma 38 similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 408.0
  • Bit_score: 440
  • Evalue 6.90e-121
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 408.0
  • Bit_score: 440
  • Evalue 3.40e-120

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGAGCGGTCCACAGCCGCGCGAGCCGCCCAGCCCTTCGCCGGACCCTGGGGCGCAGCACGCCCCCGAGGTCGCCGACTTGATCGCGCTGGGCCGCGAGCGCGGCTTTGTCACCAGTGTCGACATCGAGGGCGTCAGCCGCCACGTCAGCGCCAACGCCGCTGAGCTGCGCGCGCGGTTGCAGGACGAGGGCATCGACGTGGTGCCCGTGCCCCCAAGTGGGTCACCGTCGCCGTCGGGCGAACAGCACTCGCTTGCCGGCCAGGGCGGCGATTCGGTGCGGCTGTACCTGGCAGAGATCGGCCGGGTGCCGCTGCTGAGCGCCGAGCAGGAGGTCGACCTCGCCAAGCGGGTCAACGCCGGCGAGTTCGCCGCCGCCAGGCTGACCTCGGGCGAGGCGTTGGACGCCGAGCGGGCCCGCGCGCTGCGGCGCGCCCGCCGCGGCGGGGAGATCGCCCGGCGCCGGATGGTCGAAGCCAACCTGCGGCTAGTGGTGTCCATCGCCAAGCGCTACGTCGGCCGGGGGCTGTTGTTCTTGGACCTGGTCCAGGAGGGAAACCTCGGACTGCTTCGTGCCGTGGAGAAGTTCGACCACACCCGCGGCTACAAGTTCTCCACCTATGCGACGTGGTGGATCCGCCAGGCGATCACCCGCGCCATCGCCGACCAAAGCCGCACCATCCGCATTCCGGTGCACATGGTCGAGACCATGAACCGCGTCGCCTGGATACAGCGCCGGCTGGCCCAGGAGCTGGGCCGCGAGCCCACCGTCGAGGAGATCGGCGCCGAGACCGAGCTCAGCGGCGAGCGCGTGAGCGAGATCCTGGGCCTGGTCCAGGAGACGGTCAGCCTCGAGGCGCCGGTGGGCGAGGAGGACGAGTCCAGCCTGACCGACCTCGTAGAGGACCCCGACGCGGTCGTGCCTGTGCAGGCGGCGAGCTTCGTGCTGCTGCGCGAGCAGCTCGCCGATGTGCTGCACACCCTCAGCGAGCGCGAGCAGCAGGTCATCGAGTTGCGCTTTGGCATGGGCGACGGGCGCCCCCGGACCCTGGAGGAGGTCGGGACCGCTTTTGGCGTCACTCGTGAGCGCATTCGCCAGATCGAGTCCAAGACGCTGGCCAAGCTGCGCCATCCCTCCCGCAGTCGGCCCCTGCAGGGGTATTTGGAGGAGTGA
PROTEIN sequence
Length: 391
MSGPQPREPPSPSPDPGAQHAPEVADLIALGRERGFVTSVDIEGVSRHVSANAAELRARLQDEGIDVVPVPPSGSPSPSGEQHSLAGQGGDSVRLYLAEIGRVPLLSAEQEVDLAKRVNAGEFAAARLTSGEALDAERARALRRARRGGEIARRRMVEANLRLVVSIAKRYVGRGLLFLDLVQEGNLGLLRAVEKFDHTRGYKFSTYATWWIRQAITRAIADQSRTIRIPVHMVETMNRVAWIQRRLAQELGREPTVEEIGAETELSGERVSEILGLVQETVSLEAPVGEEDESSLTDLVEDPDAVVPVQAASFVLLREQLADVLHTLSEREQQVIELRFGMGDGRPRTLEEVGTAFGVTRERIRQIESKTLAKLRHPSRSRPLQGYLEE*