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sw_7_scaffold_3419_3

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3319..4086

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036C51C6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 249.0
  • Bit_score: 304
  • Evalue 1.40e-79
FliA/WhiG family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 251.0
  • Bit_score: 299
  • Evalue 7.30e-79
RNA polymerase, sigma 28 subunit, FliA/WhiG family {ECO:0000313|EMBL:ABW10430.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pe similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 251.0
  • Bit_score: 299
  • Evalue 3.60e-78

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGAGCGACGCCTCGTCGTACACGCGCGAGGACACCAAGGAGCTGTTCCGCGAGCTTCGCGAGACCGGCGACCCCGAGGTGCGCGAGACCCTGGCGCGGCTGCACCTGCCGTTGGTGGAATACCTCGCGCGGCGCTTCAAGGACCGTGGCGAGCCCATCGAGGACCTGGTGCAGGTGGGATCGGTGGGCCTGCTGAAGGCGATCGACCGCTTCGACGTCGATCGCGGCGTGGAGTTCTCCACCTACGCCACCCCCACGATCGTCGGTGAGCTCAAGCGCTACTTCCGCGACAAGGGCTGGGCCGTGCGGGTGCCGCGGCGCCTGCAGGAGCTGTCGCTGCGGCTGAACAAGATCGTGGCCCAGCTGACCCAAGAGCTCGGGCGCAGCCCCACCGTGTCGGAGCTGGCACAGGCGGCCGAGGTCAGCGAGGAGGAGGTCCTGGAAGCCCTGGAGTCCGGGCAGGCGTACTCCACGGCCTCGCTGGACGCCCCCTCCGGCGAGGAGGACGACGCCCCGGGGCGCGTGGAGCGCATGGGCGACGAGGACGTCCAGTTGGAGAACCTGGAGTACTTCGCGTCCCTGGCCCCGCTGATCCAGCAGCTGCCCGAGCGCGAGCGCACCATCCTGTACCTGCGGTTCTTCCAGGGGCTGACCCAGTCCGGGATCGCCGAGGAAGTGGGCATCAGCCAGATGCACGTGTCCCGGCTGCTGTCGCGCATCCTGGGCTATCTGCGCGACGGCATGGTGGGAGCGGACCAGGAGCCCTAG
PROTEIN sequence
Length: 256
MSDASSYTREDTKELFRELRETGDPEVRETLARLHLPLVEYLARRFKDRGEPIEDLVQVGSVGLLKAIDRFDVDRGVEFSTYATPTIVGELKRYFRDKGWAVRVPRRLQELSLRLNKIVAQLTQELGRSPTVSELAQAAEVSEEEVLEALESGQAYSTASLDAPSGEEDDAPGRVERMGDEDVQLENLEYFASLAPLIQQLPERERTILYLRFFQGLTQSGIAEEVGISQMHVSRLLSRILGYLRDGMVGADQEP*