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sw_7_scaffold_8141_3

Organism: SW_7_Actinobacteria_72_16

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(858..1445)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 194.0
  • Bit_score: 234
  • Evalue 2.20e-59
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 194.0
  • Bit_score: 234
  • Evalue 1.10e-58
3-isopropylmalate dehydratase small subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDW1_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 194.0
  • Bit_score: 234
  • Evalue 7.80e-59

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Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 588
ATGCAGCCGGTCACGGTGATCACCGGGACGATGGCGCCGCTCTATCGCGCCGACGTCGACACCGACCAGATCATGCCCAAGCAGTTCCTCAAGCGCGTGGAGCGCACTGGCTTTGGGCAGTTCGTCTTCCACGACTGGCGCGAAGACCCCGACTTCGTGCTCAACGACGAGCGCTACGCGAGCGCGACCGTGCTGGTCACCGGGCCCAACTTCGGGTCGGGCTCGTCGCGTGAGCACGCGCCGTGGGGGCTGCAGCAGCACGGCTTCGAGGCGATCATCGCGCCCAGCTTCGCCGATATCTTCAAGACCAACTGCGCCAAGAACGGGCTGTTGACCGTCGAGCTCGACGACGACCACATCCGCGAGCTCGTCGCCCTCGCTCACGCCGATCCGGCGGCCCAAATTCGCATCGACTTGCCCGAGCAGACCGTGGAGTCCGCCGCTGGCGTGGCACGCTTCGACATCGATGCCCACACCAAGCACATGCTGGTGGCAGGCCTCGATCCGATCGGGTTGACGCTGCAGCACCAGACCCGCATCGGCGAGTTCGAGGCCCGCCGGCTGGCCCACCGACCCACCACCGCGTGA
PROTEIN sequence
Length: 196
MQPVTVITGTMAPLYRADVDTDQIMPKQFLKRVERTGFGQFVFHDWREDPDFVLNDERYASATVLVTGPNFGSGSSREHAPWGLQQHGFEAIIAPSFADIFKTNCAKNGLLTVELDDDHIRELVALAHADPAAQIRIDLPEQTVESAAGVARFDIDAHTKHMLVAGLDPIGLTLQHQTRIGEFEARRLAHRPTTA*