ggKbase home page

sw_7_scaffold_349_16

Organism: SW_7_Halobacteria_68_16

near complete RP 34 / 55 MC: 5 BSCG 28 / 51 MC: 3 ASCG 37 / 38 MC: 5
Location: comp(11347..12675)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 459.0
  • Bit_score: 522
  • Evalue 6.00e-145
Probable tRNA pseudouridine synthase D n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BQZ1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 459.0
  • Bit_score: 522
  • Evalue 4.30e-145
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 459.0
  • Bit_score: 520
  • Evalue 4.60e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloterrigena thermotolerans → Haloterrigena → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1329
ATGGGGCCGGCACACGAGCGCGAGCGGGCGGTCGGCATCGCCCACTACCACAGCGACCCGGACGGGATCGGCGGTCGCCTCCGACGCGATCCCGAGGACTTTCGCGTCGTCGAGCGGGAGTGGTTCGACGTCGAACCGGCCGACGCGCCGGCGGACGCCTACCCCCACGTCGTCCTCCGGGTCCGGCTCCGCAACTGGGAGACCGGTGCCTTCGCCGGTCGGCTCGCCGACGCGCTCGGTATCAGCCGCGAACGCGTCTCCTGGGCGGGAACGAAGGACCGCCGCGCCGTCACGACCCAGCTGATGAGCGTTCGGGGCGTCGATCCCGGGGCCGTGCCGACGACGGGGATCGACGACGCCGAGATCGAGGTCGTCGGGCGGGCCGGACGGGGAATCCACTTCGGGGACCTCGCGGGCAACGAGTTCGAGATCGTCGTGCGCGATCCCGATCGAACCGATACGATCGACGCCATCACCGCCGACCTGACCGCCGATTCGGAGGACAAAGTGGACGACGACCACACGACCGTCGCGGTCCCGAACTACTTCGGCCACCAGCGGTTCGGAAGCCGCCGACCGGTCACCCACGAGGTCGGACTGTCGATCGCCCGCGGGGACTGGGAGGCGGCCGTCCGGACGTACGTCACGGCGACCGATCCCGCCGAACCCGAGGATACGCGGGCCGCCCGCGAGTTCGCGGCCGAGGCCGAGCCGGCGGCGGCCCTCGACCGGTTTCCCGAGCGGCTGTCATACGAGCGGGCGCTGTTACACCGCCTCGACGAGGGCGGAACCCACCGCGAGGCGATCGAGGCCCTCCCCACCTCGCTCCAGCAACTGTTCGTCCACGCGGCCCAGTCGTACGTGTTCAACCGCATCGTCAGCGAGCGCGTCTCGCGGGGGCTGTCCCTCTCGGCACCCGTCGCCGGGGATACGGTCTGTTTCGCGGCGACCGACGCGCCCCCGGGACTGACGGTGCCCGATGTCGACCGCACGCAGGCGGCCACCGAGGATCGCCTGTCGATCCTGCGACGACACTGCGAGCGCGGGCGGGCCGTCGTCACCGCGCCGCTGGTGGGCACCGAGACCGAACTGGCGACCGGCGAGCCCGGCGAGATCGAGCGGGCGGTCCTCGACGATGTCGGGATCATCCCCGAGGCGTTCGCCCTGCCGGAGCCGTTCGGATCGACGGGAACGCGACGGGCGATCGAACTCCGGTCCGACCTGACGGTGACCCGCGACCCGGTCACGTTCGCCTTCGCGCTCCCGAGTGGATCCTACGCCACCGTCCTGCTTCGGGAGTACCTGAAAACTGACCCGACGGCCCTCTGA
PROTEIN sequence
Length: 443
MGPAHERERAVGIAHYHSDPDGIGGRLRRDPEDFRVVEREWFDVEPADAPADAYPHVVLRVRLRNWETGAFAGRLADALGISRERVSWAGTKDRRAVTTQLMSVRGVDPGAVPTTGIDDAEIEVVGRAGRGIHFGDLAGNEFEIVVRDPDRTDTIDAITADLTADSEDKVDDDHTTVAVPNYFGHQRFGSRRPVTHEVGLSIARGDWEAAVRTYVTATDPAEPEDTRAAREFAAEAEPAAALDRFPERLSYERALLHRLDEGGTHREAIEALPTSLQQLFVHAAQSYVFNRIVSERVSRGLSLSAPVAGDTVCFAATDAPPGLTVPDVDRTQAATEDRLSILRRHCERGRAVVTAPLVGTETELATGEPGEIERAVLDDVGIIPEAFALPEPFGSTGTRRAIELRSDLTVTRDPVTFAFALPSGSYATVLLREYLKTDPTAL*