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sw_7_scaffold_3851_8

Organism: SW_7_Haloarcula_66_18

near complete RP 32 / 55 MC: 4 BSCG 22 / 51 MC: 2 ASCG 33 / 38
Location: comp(5306..6433)

Top 3 Functional Annotations

Value Algorithm Source
Nonsense mediated mRNA decay protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY01_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 379.0
  • Bit_score: 632
  • Evalue 2.50e-178
Nonsense mediated mRNA decay protein {ECO:0000313|EMBL:EMA25748.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amy similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 379.0
  • Bit_score: 632
  • Evalue 3.50e-178
nmd3; nonsense mediated mRNA decay protein similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 376.0
  • Bit_score: 631
  • Evalue 1.60e-178

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Taxonomy

Haloarcula amylolytica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1128
ATGAGTCGGTCCGGAGCCTTCTGTCCCGAATGTGGCGACGAGTTCGAGCCACCCGAGGACCGCCCCGCGCTCCCGGGCCCGAAGCGGGACTCCGAGCGAGTGCTGTGTGACGCCTGTTATTTCGAGACGTTCGACCTCGTGGACGCCCCCGAGACCATCGAGGTCCGTGTCTGTAGCCGGTGTGGGGCGGTCCACAAGGGGAGCCGCTGGGTCGACGTGGGCGCCGAGGACTACACCGACATCGCCGTCGAACAGGTCAGCGAGGCCCTGTGCGTCCACGTCGACGCCGAGGCCGTCGACTGGCAGGTCGCGCCAGAACAGCTCGACAAGAACAATATCCGGATGCACACGGAGTTCTCTGGCGTGGTTCGGGGTGTGCCGGTCCACGAGCAGGTGACTGTCCCCGTGCGTGTCTCCCGCCAGACGTGCAAACGCTGCGGGAAGATAGCCGGGGGCTCCTTTGCCAGCGTCGTCCAGGTCCGAGCCGACGGGCGAGACCCGACCGACGAGGAAATCGAGCGCGCCAAGACCATCGCCCAGGAGTACATCGCCGAGCGGGAGGCAACGGGGGACCGCAACGCCTTCATCACCGAGACCAACGAGGTCAACGACGGGCTGAACATGAAGATATCGACGACCCAGATGGGCCAGGGCATCGCCAAGCGCATCACGGCCCAGCTGGGCGGGGGGTACTCCGATTCGAAGCGGCTCATCACCGAAGACGAGGACGGCCAGAAGCTCTACCGGATGACCTACGCCGTCCGCTTGCCACGCTATCGCCAGGGGGAGATAATCGACCCCGAGGACGGCGACGGCCCCGTCCTCGTGCGGTCGGTCCAGGGGAACCTGAAAGGGGTGCGCCTGGCGACCGGCGAGGCCTACGAGGCCCGCTTCGAGGAGGGCGAGGCCCCCGACGCCCGCCGGCTGGGCTTTCGCGAGGACGGCCAGCCGACGACGCTCGTCGCCGTCGAGGACGACAACGCCGTCCAGGTGCTCGACCCCGAGACCTTCGAGAGCGTGACCGTCCCGCGACCGGCGTATCTGGACGCCGACGCCGACGAGGTACCGGTCATCAAGAGCCATGCAGGGCTACACGTCCTGCCGGCGGGCGAGCGCGACGATGCGTGA
PROTEIN sequence
Length: 376
MSRSGAFCPECGDEFEPPEDRPALPGPKRDSERVLCDACYFETFDLVDAPETIEVRVCSRCGAVHKGSRWVDVGAEDYTDIAVEQVSEALCVHVDAEAVDWQVAPEQLDKNNIRMHTEFSGVVRGVPVHEQVTVPVRVSRQTCKRCGKIAGGSFASVVQVRADGRDPTDEEIERAKTIAQEYIAEREATGDRNAFITETNEVNDGLNMKISTTQMGQGIAKRITAQLGGGYSDSKRLITEDEDGQKLYRMTYAVRLPRYRQGEIIDPEDGDGPVLVRSVQGNLKGVRLATGEAYEARFEEGEAPDARRLGFREDGQPTTLVAVEDDNAVQVLDPETFESVTVPRPAYLDADADEVPVIKSHAGLHVLPAGERDDA*