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sw_7_scaffold_173_6

Organism: SW_7_Halobacteriales_64_20

near complete RP 33 / 55 MC: 4 BSCG 25 / 51 MC: 2 ASCG 35 / 38
Location: comp(4099..4491)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 132.0
  • Bit_score: 69
  • Evalue 3.10e-09
Ribonuclease VapC n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X1L2_9NOST similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 132.0
  • Bit_score: 69
  • Evalue 2.20e-09
putative nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 132.0
  • Bit_score: 69
  • Evalue 6.30e-10

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Taxonomy

Cylindrospermum stagnale → Cylindrospermum → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGAGTACCGACGGCACGAACGGCGACTATCTCCTCGATACCTCCTTTCCCATCCACTTGCTCTACGAGAAAGACGACGCCGTGACGCTCCATAGCGATATTCGTGGCCGGGAAGTCATTAGCACAGTCGCCCTCTACGAGCTTCACAAGGGGAGCAACTTCGATCCGGGCGAGTTCGAAGAGATGTACGTCGTCGGGTTTTGCCCCGAGGACGCCGAAGCAGCAGGGGAGATATGGCGATCACTGAAGTCGAACGGAAAGCCCATCGGTGGTATGGACACCGTCATCGGCGGTATAGCCCTGCATCGGAATCTGACCGTCGTTACGGACAACACCAAACGTTTCGAGCGGATCGATGGACTGTCTGTAAGAGAATACCGTGACCGATCGTAG
PROTEIN sequence
Length: 131
MSTDGTNGDYLLDTSFPIHLLYEKDDAVTLHSDIRGREVISTVALYELHKGSNFDPGEFEEMYVVGFCPEDAEAAGEIWRSLKSNGKPIGGMDTVIGGIALHRNLTVVTDNTKRFERIDGLSVREYRDRS*