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sw_8_scaffold_1589_18

Organism: SW_8_Halorubrum_68_21

near complete RP 32 / 55 MC: 4 BSCG 28 / 51 MC: 1 ASCG 37 / 38
Location: comp(19736..20752)

Top 3 Functional Annotations

Value Algorithm Source
Linocin_M18 bacteriocin protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9V9_HALJB similarity UNIREF
DB: UNIREF100
  • Identity: 22.7
  • Coverage: 326.0
  • Bit_score: 88
  • Evalue 1.20e-14
Linocin_M18 bacteriocin protein {ECO:0000313|EMBL:BAQ71248.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 335.0
  • Bit_score: 150
  • Evalue 3.60e-33
Linocin_M18 bacteriocin protein similarity KEGG
DB: KEGG
  • Identity: 22.7
  • Coverage: 326.0
  • Bit_score: 88
  • Evalue 3.40e-15

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Taxonomy

Rhodovulum sulfidophilum → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGTCGACGCAACAACAGACCGACCAGATCACCGACCACGTCATCCGACAGGTGAGGGCGAACAAGGAAGCTCGAATCCGTGCGAACGAGGACCCGCTGTACGATGTCCGGGCCAACGACACCGGGCTTCGTGACGACGAGTGGGAGTCGGTGGACGACGAACTCGTTGCCGTCGCTCAAGAGCGGCTTAGTATCGTGGACGTTGCGCTTGAATTGGGCCTGACCCGCGACATTTCGCTCGGCACGCTCACCGACACTTGGGAAAACGTGTCGGAATTTGGCACGGCGGACGTATCGATGAGTGCCGAAGCTCCCGCGTCTGAGGACGGCATCCAATACGGCGGCAATGGCGTTCCCATCCCGGTCACAAAGAAGGGAATGAGAATTGGGCGGCGGCAACTCCTTGCGTCCCGTGAGCGTGGGCAAGGGCTTCCGGTGGACGGTATCACCGCCGCCACGCGGAGCGTGAGCGAACGGCTCGAAAACCTGTTCGCGTATGGCTGGAACCGCGACGTGGACAGCTACTCCCTCCCCGGCTTTATGACGCATCCAAAGGTCGATTCCGTCGACGTGGCGGGACCGTGGGACACGGACGCGGCGAACGTCCGCCCCACGGTACGGAATCTCATTGCTGCGCTCGACGTGGACAACAATTTCGGCCCGGGCGATACGGGGTACGTCCTCCACCTCGGGCCGGCGGCGAACCGCGTTATCGCGGACTCCATAGACCCGGACGGCACGGGCGACCTGAACCTTCGCCAGCGCATTCAACAGGATTTCACCGAAATCAGTCGCATTGAGCGCACCGCCGCGCTCGACCCCGGCGATGCGTTCCTCTATAAACCGACCACGGAAACGTTCAAAGTCGGAATGGCGGCCGACCTCCAAACGCTGGAGTGGGAAAGCGGCAGCGGAATGTCGAGTCACGTACAGGTGTTCGCGGCGATGGCCCCGGAGATCCGGAGTGACATAAACGGCAATGTCGGTGTTGCCAAGGCTACTGGAATAATTTCGTAG
PROTEIN sequence
Length: 339
MSTQQQTDQITDHVIRQVRANKEARIRANEDPLYDVRANDTGLRDDEWESVDDELVAVAQERLSIVDVALELGLTRDISLGTLTDTWENVSEFGTADVSMSAEAPASEDGIQYGGNGVPIPVTKKGMRIGRRQLLASRERGQGLPVDGITAATRSVSERLENLFAYGWNRDVDSYSLPGFMTHPKVDSVDVAGPWDTDAANVRPTVRNLIAALDVDNNFGPGDTGYVLHLGPAANRVIADSIDPDGTGDLNLRQRIQQDFTEISRIERTAALDPGDAFLYKPTTETFKVGMAADLQTLEWESGSGMSSHVQVFAAMAPEIRSDINGNVGVAKATGIIS*