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sw_9_scaffold_3426_5

Organism: SW_9_Halococcus_67_24

near complete RP 28 / 55 MC: 5 BSCG 25 / 51 MC: 3 ASCG 38 / 38 MC: 3
Location: 3303..4781

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1227456 similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 493.0
  • Bit_score: 839
  • Evalue 2.50e-240
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2P2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 493.0
  • Bit_score: 839
  • Evalue 1.70e-240
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 465.0
  • Bit_score: 575
  • Evalue 1.70e-161

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1479
ATGTCCATTCTCGACGACGCGCGGGCCGTCATCGCCAACGGTCCCATCTGTGATCCCTGCCTCGGCCGGGCCTTCGCCGAGCGGAGTTTCGGCCTCACGAACGACGAGCGCGGCCACGCCCTCCGGGTCGCGAGCGCGCTCGACGACGACGAGCCGTTCGAGCCCTCGGAGGGACCGGAGGCGTGCTGGGTCTGCGAGGGCGAGTGTGGGAACTACGACACGTGGGCCGAGCGCGCGGTCGATGCGCTCGACGGAATCGAGTTCGCGACCTACCAGGTCGGCACGCGCGTCCCGCCACTCGTCGAGGAGAACGACCGCCTGCTCCGCGAGGACAGCGGCCTGCCCACCGACGCCGGCGAGTCGTTCAAGTCCGCCTTCAATCGCGAGGTCGGCAAGCGCGTGGGCGAACGCACGAACTCGACTGTGGATTTCGAGCGCCCGGACGTGCTCGCGCTCGTCAACCTCGAACGCGGCGACGTCGACGTACAGGTCAACCCCGCGTTCGTCTACGGCCGGTATCGCAAGCTCGATCGCGGCATCCCACAAACCGAGTGGCCCTGCCGGGAGTGTGGCGGCGGTGGCACCCGGCTCGCCGCCGACGGCGGCACCGAGCCCTGCGATCACTGCGGCGGCTCCGGCTATCTCTACGAGGAGAGCGTCGAGGAGCTGACCGTGCCCGTGGTTCGGGACGCGATGGACGGTGCGGACGCGGTGTTCCACGGCGCGGGCCGCGAGGACGTCGACGCACGCATGCTCGGTACCGGTCGACCGTTCGTGATCGAGGTCAAGGAGCCAGGCCGCCGCGCGATCGACCCCACGGCGCTCGAACACGAGATCGACGACTTCGCCGACGGCACGGTCGAGGTCGAGGGACTCCGGCGCGCGACTCACGAGATGGTCGAGCGCGTGAAGGAACTCGACGCCCACAAGACCTACTCGATGAGTGTGACGTTCGCCGAGCCCGTCGCCGAACGGGCGTTCGCGGACGCACTCGCCGCCCTTGATGACGCGATGATCGCCCAGGACACCCCCGAGCGCGTCGATCACCGTCGGGCGAGTCGCACCCGCGAGCGCACGGTGTACGAGATCGACGGCGCGCTCGAACCCGACGGCGACGCCGGAACCGACAGCACTCGCGACGTCGATCCTGCCGATAGCGCAACCGACGCCGATGCCGCTATCGACGCGGACGACGACGGCGAAGACGGCGCACGCCGCGCGACGGTCGAACTCCGTGGCGAGGGCGGGCTCTACGTCAAGGAACTCGTGAGCGGCGACGGCGACCGGACCGAGCCGAGCCTCGCGGGGCTGCTCGCGGTCGACGCCACGGTCACGGCACTCGATGTCCTCGCTGTCGAGGGCGAGGACGAACCGTTCGCAACGCCCGAGTACGTGGTCGAGAGCGGCAGCGATGGGGACGCAGACGACACAGACAAGCACACGAACGACGGCGAAGGCGAGGCTCGGCGGAACGGTTAA
PROTEIN sequence
Length: 493
MSILDDARAVIANGPICDPCLGRAFAERSFGLTNDERGHALRVASALDDDEPFEPSEGPEACWVCEGECGNYDTWAERAVDALDGIEFATYQVGTRVPPLVEENDRLLREDSGLPTDAGESFKSAFNREVGKRVGERTNSTVDFERPDVLALVNLERGDVDVQVNPAFVYGRYRKLDRGIPQTEWPCRECGGGGTRLAADGGTEPCDHCGGSGYLYEESVEELTVPVVRDAMDGADAVFHGAGREDVDARMLGTGRPFVIEVKEPGRRAIDPTALEHEIDDFADGTVEVEGLRRATHEMVERVKELDAHKTYSMSVTFAEPVAERAFADALAALDDAMIAQDTPERVDHRRASRTRERTVYEIDGALEPDGDAGTDSTRDVDPADSATDADAAIDADDDGEDGARRATVELRGEGGLYVKELVSGDGDRTEPSLAGLLAVDATVTALDVLAVEGEDEPFATPEYVVESGSDGDADDTDKHTNDGEGEARRNG*