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sw_9_scaffold_367_1

Organism: SW_9_Halococcus_67_24

near complete RP 28 / 55 MC: 5 BSCG 25 / 51 MC: 3 ASCG 38 / 38 MC: 3
Location: comp(1..504)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1A8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 282
  • Evalue 2.20e-73
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 168.0
  • Bit_score: 282
  • Evalue 3.00e-73
tfbA2; transcription initiation factor TFB similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 171.0
  • Bit_score: 279
  • Evalue 5.20e-73

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Taxonomy

Halococcus hamelinensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 504
ATGGCCGACACGCGCGAACGCACACGAGACATCGAGGCGGAGAGCGACGCCGAAACCGAACGCGAGACCGAGGTTGAGCGGGAGCGAGAGGCGGAAGCTTCCGAAGACGAACTGCTCTGTCCGGAGTGTGGCGGCCGCCTCGTGAGCGACACCGAGCACGGCGAGACCGTGTGTACCGACTGCGGGCTGGTGGTCGAGACCGACGAGATCGACCGTGGCCCCGAGTGGCGGGCGTTCGATTCGGCCGAGCGCGACCAGAAGTCCCGCGTCGGGGCCCCGACGACGAACATGATGCACGACAAGGGCCTCTCCACGAATATCGGCTGGCAGGACAAGGACGCCTACGGCAACAGTCTCTCCAGCCGCCAGCGCCAGAAAATGCAGCGCCTCCGCACCTGGAACGAGCGCTTCCGCACCCGCGATTCGAAGGAGCGCAACCTCAAACAGGCCCTCGGCGAGATCGACCGGATGGCCTCCGCTCTGGGACTCCCCGATTCGGTCCGC
PROTEIN sequence
Length: 168
MADTRERTRDIEAESDAETERETEVEREREAEASEDELLCPECGGRLVSDTEHGETVCTDCGLVVETDEIDRGPEWRAFDSAERDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDSVR