ggKbase home page

qs_9_scaffold_12354_1

Organism: QS_9_Parcubacteria_51_6

partial RP 17 / 55 BSCG 20 / 51 ASCG 4 / 38
Location: comp(1..750)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 244.0
  • Bit_score: 202
  • Evalue 1.20e-49
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE435 similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 250.0
  • Bit_score: 235
  • Evalue 5.90e-59
DNA-directed RNA polymerase subunit alpha Tax=GWC1_OD1_36_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 254.0
  • Bit_score: 242
  • Evalue 5.20e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_36_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGGATATCTCCCTCCCCAACAAGCCCAAGCTCGTTGATGAAACGTCAGAAAACTCGGCAACGTACGAAATATCTCCGTTGTTTCCCGGGTATGGAGTGACGGTTGCCAATTCTTTGCGTCGTGTTATGCTCTCCAGCTTGTCGGGTACGGCCGTTTCTTCCGTACGTATCAGCGGAGTGGAGCATGAGTTTTCCACCATTCCCAACGTACTTGAAGACGTCGTGGATATCTCGTTAAACTTAAAAGCCGTTAAGTTTCGGTTGCACGGAGTGGATTCCGCCACGGCCACGCTCAAAGTAACCGGCAAAACCGAAATAACCGCCGCCGACCTCCAAACCGGAAGCGAAGTGGAAACGGTCAACCCCGAAGCGCCCATTCTGACCCTCTCCGACCCTTCGGAGACCATAGAAATGGAGCTAACCATTACGCGCGGAGTCGGGTTTGTGAAGGCCGACGAGCAAAATCTGCCCCGAGAAATCGGACTTATTGCGTTGGACGCCGTATATTCTCCGGTAAAACGTGTTTCTTACTCCGTGGAAGACATTCGCGTCGGCGATGTAACCAACTATAACAAAGCGGTGTTTGAAATCACGACCGACGGAGCCGTAACTCCGTACGAAGCCATTACGCGAGCGGCGGGTATTTTGGTTGAGCAGTTTACGGCCTTGACTGATCCTTCCGCCTCGGAAAAAGAGCTTTCCGCCGGAGAAAATGCGGAGTCCGAGTCCGAAGAGGGAGCTTCTTCCGGT
PROTEIN sequence
Length: 250
MDISLPNKPKLVDETSENSATYEISPLFPGYGVTVANSLRRVMLSSLSGTAVSSVRISGVEHEFSTIPNVLEDVVDISLNLKAVKFRLHGVDSATATLKVTGKTEITAADLQTGSEVETVNPEAPILTLSDPSETIEMELTITRGVGFVKADEQNLPREIGLIALDAVYSPVKRVSYSVEDIRVGDVTNYNKAVFEITTDGAVTPYEAITRAAGILVEQFTALTDPSASEKELSAGENAESESEEGASSG