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sw_8_scaffold_6625_1

Organism: SW_8_Bacteroidetes_43_5

partial RP 23 / 55 BSCG 21 / 51 ASCG 2 / 38 MC: 1
Location: comp(45..440)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transportern ExbD n=1 Tax=Psychroflexus tropicus RepID=UPI000373796F similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 130.0
  • Bit_score: 143
  • Evalue 1.60e-31
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:GAO31814.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicu similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 128.0
  • Bit_score: 141
  • Evalue 6.50e-31
biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 130.0
  • Bit_score: 136
  • Evalue 5.50e-30

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 396
ATGAATTTAAGATCGCGCAATAAAGTCAATGCCACGTTCAATATGTCCTCACTGACCGATGTTGTGTTCCTGTTGCTCATCTTTTTCATGCTGACGTCCACACTTGTGAGCCCGAATGCATTGAAGCTCCTCCTGCCCCAATCGGATTCGCAGACACGTGCCAAAAAAAACATTGCCGTGTCTATCACTGAGCAAAAGAATTACTACGTGGGTGAGCAGCAAGTGAGTTTAAGCGAAATGCCGGGCGTTCTACGGCAACGTCTTAAGGGTGAAGAAAACCCAACCGTGGTGGTCAATGCTGATAAAAATGTACCTATCAACAACGTGGTTCAGGTAATGAACATCGGCAATGACTTAAAAGTGAAAATGATCCTGGCTACTCAACCTGAGAAATAA
PROTEIN sequence
Length: 132
MNLRSRNKVNATFNMSSLTDVVFLLLIFFMLTSTLVSPNALKLLLPQSDSQTRAKKNIAVSITEQKNYYVGEQQVSLSEMPGVLRQRLKGEENPTVVVNADKNVPINNVVQVMNIGNDLKVKMILATQPEK*