ggKbase home page

qs_1_scaffold_17127_1

Organism: QS_1_TM7_53_6

partial RP 31 / 55 MC: 2 BSCG 33 / 51 MC: 1 ASCG 3 / 38
Location: 3..467

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 153.0
  • Bit_score: 198
  • Evalue 5.30e-48
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel id=4576008 bin=GWA2_Bacteroidetes_A19_40_15 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 145.0
  • Bit_score: 190
  • Evalue 1.30e-45
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 147.0
  • Bit_score: 152
  • Evalue 8.70e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_OD1_41_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 465
GTCATTGATCTGGACGGCGACTGGGGCGTGGTAGAAGACATTACATTGCGTTACGTAAGCCTTCGTGATCTGGATGGCGCCGTACATCACATCCCCCATAGCACGGTTGATCGGGTAAAAAACCTCTCCAAAGACTTTGGTCGAATCAACTTGGATATCGGCGTCTCCTATGGCTCTGATATCAACCAAGTCATAAAGGTCGTTGACAGGATCGGGAAAGAGTTAGCCGATGACGAAGACTGGAGAGAAATTATTATTACTCCGCCGCAATTCTGGCGCGTCGACAACTTTAGCGATTCAAGTATCGAGGTCAAAATCGTGGGTGAAACTACCCCGCTTATGCAGTGGAGTGCCGCCGGAGAATACCGTAAACGACTCAAAAACGCGTTTGACGAAGAGGGCATAGAGATCCCCTTCCCCCAACGCGTCATACACACGGACCCAAAAAACCCCAAAGACACCTAA
PROTEIN sequence
Length: 155
VIDLDGDWGVVEDITLRYVSLRDLDGAVHHIPHSTVDRVKNLSKDFGRINLDIGVSYGSDINQVIKVVDRIGKELADDEDWREIIITPPQFWRVDNFSDSSIEVKIVGETTPLMQWSAAGEYRKRLKNAFDEEGIEIPFPQRVIHTDPKNPKDT*