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DolZOral124_scaffold_963_5

Organism: DOLZORAL124_Bacteroidales_40_8

partial RP 26 / 55 MC: 9 BSCG 25 / 51 MC: 9 ASCG 11 / 38 MC: 6
Location: comp(3589..6948)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1515615 species="Bacteria; B similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 999.99
  • Bit_score: 1259
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TMU1_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 999.99
  • Bit_score: 1224
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 999.99
  • Bit_score: 1164
  • Evalue 0.0

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Taxonomy

Porphyromonas sp. COT-290 OH860 → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3360
ATGTTGAATAAAGAGATGATGCTCTCGTTCAAGGGGGAGCTTAGCAGTATAAAACGTAGCAAACAAGATATTACACTCCTAGGCTTAAAGGGAGCTAGCTTTTCCCTCCTTTTGGCTAGTCTATATCAAGAAAAACTTCCCTTGCTCTGCCTTATGTCCGATGCAGATGAAGCTGCTTATCTTTATTCTGATTTAAGTCAATTTTATAATGAGGAAGAGTTGTTTTTCTTCCCTTCTAGTTATCGTAGAGCTATTAAGTATGGGCATAGAGATGAACCAAATGCTACACTAAGAACAATCCTCTTGGCTAATCTAGCAGAGGCAAACAAAGGCAAACGAGCTTATCCACTTATTGTTACTTATCCTGAAGCTTTGCTTGAGGCTGTCGTATCAAAGGAAGAAGTTCTAAGCGATTGCATTAGTCTAAAGAAAGGGGATGAGATTAAGCAAAATGAATTGAGAGATAAGCTCTTATCTTGGGGCTTCGAGCGTGTTGATTATGTCTATGAAGCTGGGCAGTTTGCTATTCGTGGAAGTATCTTTGATGTCTATGCTTATGCAGAGGATTATCCTATTCGTTTAGATTTCTTTGATGATGAGTTGGAGAGTTTACGCTTTTTCAGTGTAGAGCAACAGCTATCTATTCGCCAACTTGAAGAGGTAAGTATAATGCCTGATGTCGCTTCGGGTTTTAATGAAAATCGCTCTCCTCTGACTGATTTATTGAGTAAAGATTATCGTATAATTCGCCCTCTTGGAGGACATCTTACAGAAAGCTTTGACTTCGTTTGGAACGATGAACCTAACGTTTCTGATGAAGAAGACTTTGATAGTATAGAGCGTATTCGTAAGCTTTTGATTGAACCACGCAGACTGCTTGAAGAAATCAATAAGTTTCAAGCTATTTATTATGGAGCAAAAGGGCTAGAGCATAAGATAAGTAGTAAGAAAGTTTTTGAATTTGATATAGAGCAACAGCCCTTATGCCAGCAGAACTACGAAGCATTATGTGAACAGATTAGAGCTTGGGATAGCGAAGCTTACAGCCTTTATATAAGTAGTGCCAAGCAAGAGCAATACGAACGAATCTGCGAAATACTGCAAGCTCATCATCAAGAAATTAGCTTGCCAAAGCTAGTTCCTCTTACTTTACACGAGGGTTTTATTGACCACAAGCAGAAAGTCGTTCTTCTGACCGAACATCAAATCTTTGGGCGTTATCACAAATACAATTTGAGAAGTGATAAGCTTCGTGCGGGGAAAGCGACTTTTTCGCTCAAAGACTTACAAAGTTTTCATATTGGGGACTTGGTTGTTCATTTGGATTATGGCATCGGACGTTACAGAGGTTTGATGAAAATGCAGTTGGCTGATAGAGAGGAGGAAGTCGTTTACCTTGAATACCGCAACGGAGCTTCGGTCTATGTTCAACTGCCCAATCTGCCCAAGATTTCTCATTATCGTCTGCAAGAGAATGCTTCTTCTGTAGAACTTTCTTCGCTTAACTCCACGAGATGGCACAGGTTTAAGGAAAAGACTAAGAATAAGGTTAAGGATATTGCTCGTGATTTGATTACGCTTTATGCAGAACGTAAGGAGGTTAAAGGCTTTTCTTTTAGTGAAGATACGAGCTTGCAACACGAAATGGAGGCCTCTTTCATCTATGAAGATACGCCCGACCAAGCCAAAGCTACGGAAGAGATTAAGCGAGATATGGAACGCCCCTATCCAATGGATAGATTGCTTTGTGGAGATGTGGGTTTTGGTAAAACGGAAGTTGCTATTCGAGCGGCTTTCAAAGCCGTAACGGACGGCAAGCAAGTAGCTATTCTTGTCCCAACGACAGTCTTAGCTTATCAGCATTATCGTAGTTTCTCGGAGCGTTTGAAAGACTATCCCATTCGTATTGCTTACCTCTCAAGAGCTCAGAAACCCAAAGAGATGAAAGCCATTATTCAAGCTCTATCGGAGGGTAAGATTGATATAATTATCGGTACGCATAGGCTAACAAGCAAGGATATTGCATTTCATGACTTAGGTTTGCTCATTATAGATGAAGAGCAAAAGTTTGGCGTTTCTGTAAAAGAAAAGTTACGCAAGCTCCAAACAAACGTTGATACGCTTACGATGTCAGCAACCCCAATTCCTAGAACCTTGCAATTCTCTCTTATGGGGGCAAGGGACTTATCTAACATTAACACCCCTCCAAGCAACCGCTATCCAATTGAAACGATTCATTCACGTTTCTTAGAGAGCAACATTGCAGAGGCGATTAACTTTGAGCTAAGCCGTAATGGGCAAGTTTACTTTGTGCATAATCGGATAGAAAGCATTGAGCTAATTAAGGAAACAATCCAACGAGCCGTCCCTGATGCCCGCATCGTAGTCGGGCACGGACAGATGCCAAGTGCCAAGCTAGAGCAAGTCTTACTTGACTTCGGCAATCACGATTATGACGTCTTGCTTGCCACAACAATCATAGAAAATGGTATTGACGTCTCAAACGCAAATACAATTATCATTAACGATGCTCAGAATTATGGACTAGCAGCCCTTCATCAGTTGAGGGGACGTGTGGGACGTAGCCATAGAAAGGCTTTCTGCTACCTCTTCACGCCTCCGCTCGCTAGTCTAAGTAGTGAGGCTCGTCGCAGGCTCAAAGCTATTGAGATGTTTAGCGACCTAGGGAGTGGTATTCACATCGCTTTGCAAGATTTGGATATAAGAGGGGCGGGAAATGCTTTAGGAGCAGAACAGAGTGGCTTTATTACTGAAATTGGCTACGAAGCTTATCAGAAGCTTTTTGAGGAAGCTATCAGCGAACTTAAAACATCAGAATTTACAGAATTATATCAAGATGACGAGCAGATAAAGGAACAATCACAGAGCTTCGTTCAAGACTGCTTGATTGATGTTTCGCCTATGCCAAGCTTACCTACAGACTATGTGTCCAATGATTCTGAGCGACTCTTTCTCTATCGTGAGCTAAGTAAACTAAGCACAGATGAAGCTTTACAAAAGTTTAGTGAACAGCTTATTGACCGCTTTGGTGCATATCCAGAAGAAGTGGAAGAGCTAATCCTCGTTCCTAAGCTTCGAGCAATAGCCAAGCGTTTAGGCTTTGAAAAGCTTACGCTTAAGCAGAATACGCTTATCCTACAGCTTATCGCTGACACATCAAATCCTTATTATCAATCAGCCTGTTTCGAAACTCTGTTAAGCTTCATCGCAAGCAATCATCAGGCTTATGAATTTGCTCAAAAGAATGGACGCTATCGTCTCAAAAAGCAAAAAATCTCAAGTATCAAAGAGGCAATTTCAGTTCTGGAAGCCTTGCATAACTTTGGACTAAACGAATAA
PROTEIN sequence
Length: 1120
MLNKEMMLSFKGELSSIKRSKQDITLLGLKGASFSLLLASLYQEKLPLLCLMSDADEAAYLYSDLSQFYNEEELFFFPSSYRRAIKYGHRDEPNATLRTILLANLAEANKGKRAYPLIVTYPEALLEAVVSKEEVLSDCISLKKGDEIKQNELRDKLLSWGFERVDYVYEAGQFAIRGSIFDVYAYAEDYPIRLDFFDDELESLRFFSVEQQLSIRQLEEVSIMPDVASGFNENRSPLTDLLSKDYRIIRPLGGHLTESFDFVWNDEPNVSDEEDFDSIERIRKLLIEPRRLLEEINKFQAIYYGAKGLEHKISSKKVFEFDIEQQPLCQQNYEALCEQIRAWDSEAYSLYISSAKQEQYERICEILQAHHQEISLPKLVPLTLHEGFIDHKQKVVLLTEHQIFGRYHKYNLRSDKLRAGKATFSLKDLQSFHIGDLVVHLDYGIGRYRGLMKMQLADREEEVVYLEYRNGASVYVQLPNLPKISHYRLQENASSVELSSLNSTRWHRFKEKTKNKVKDIARDLITLYAERKEVKGFSFSEDTSLQHEMEASFIYEDTPDQAKATEEIKRDMERPYPMDRLLCGDVGFGKTEVAIRAAFKAVTDGKQVAILVPTTVLAYQHYRSFSERLKDYPIRIAYLSRAQKPKEMKAIIQALSEGKIDIIIGTHRLTSKDIAFHDLGLLIIDEEQKFGVSVKEKLRKLQTNVDTLTMSATPIPRTLQFSLMGARDLSNINTPPSNRYPIETIHSRFLESNIAEAINFELSRNGQVYFVHNRIESIELIKETIQRAVPDARIVVGHGQMPSAKLEQVLLDFGNHDYDVLLATTIIENGIDVSNANTIIINDAQNYGLAALHQLRGRVGRSHRKAFCYLFTPPLASLSSEARRRLKAIEMFSDLGSGIHIALQDLDIRGAGNALGAEQSGFITEIGYEAYQKLFEEAISELKTSEFTELYQDDEQIKEQSQSFVQDCLIDVSPMPSLPTDYVSNDSERLFLYRELSKLSTDEALQKFSEQLIDRFGAYPEEVEELILVPKLRAIAKRLGFEKLTLKQNTLILQLIADTSNPYYQSACFETLLSFIASNHQAYEFAQKNGRYRLKKQKISSIKEAISVLEALHNFGLNE*