ggKbase home page

CG02_land_8_20_14_3.00_150_scaffold_6078_c_8

Organism: CG02_land_8_20_14_3_00_150_Elusimicrobia_37_13_curated

near complete RP 50 / 55 MC: 3 BSCG 48 / 51 ASCG 10 / 38
Location: comp(3755..4267)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Ignavibacteria_56_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 152.0
  • Bit_score: 119
  • Evalue 3.20e-24
RNA polymerase sigma factor SigW similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 147.0
  • Bit_score: 113
  • Evalue 3.80e-23
Tax=CG_Elusi_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 170.0
  • Bit_score: 342
  • Evalue 3.20e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Elusi_05 → Elusimicrobia → Bacteria

Sequences

DNA sequence
Length: 513
GTGAAAGCAAAAATAAATAATGAGACCTATTGCCTGGGTATTAATATGGTTATAAATCAATCAAATGACGTAGTATTAATTCAGGAGACACTTTCAGGTAATAAGAGTTCATTTGCTGTTTTGATAAACAAATATAAAAATAAAATCTTCAACCTTTGCTACCGGATGTTAAGCAATTATCACAACGCCGAAGACATTTCACAGGAGGTGTTTCTACAGGCATATAAAAAACTTGGTGAATTTAAAGTCGGTCAGAAATTTCAAAACTGGTTGTTTACCATAGCGTTAAATCTTTGCAGGAATAAACTGAGAAGAGATAATATCATCAGGTTTATTTCAATTGATAAAAAAATAAGCACAGAAGAAGATGAATTTCCGCTTGAAATTGCAGACAAAAGCCCAACTCCCGAGGAATACCTTATTCAGGAAGAAGAAAAAAAGAGAATTCATTATTTAGTGCATTCTATTCCTGTGAAATATCGTCCTGTTTTTCTTTTGAGATATACAGAATGA
PROTEIN sequence
Length: 171
VKAKINNETYCLGINMVINQSNDVVLIQETLSGNKSSFAVLINKYKNKIFNLCYRMLSNYHNAEDISQEVFLQAYKKLGEFKVGQKFQNWLFTIALNLCRNKLRRDNIIRFISIDKKISTEEDEFPLEIADKSPTPEEYLIQEEEKKRIHYLVHSIPVKYRPVFLLRYTE*