ggKbase home page

CG08_land_8_20_14_0.20_scaffold_1764_c_14

Organism: CG08_land_8_20_14_0_20_Actinobacteria_35_9_curated

near complete RP 49 / 55 MC: 3 BSCG 47 / 51 ASCG 9 / 38
Location: 13712..15265

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase B Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E4G2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 486.0
  • Bit_score: 250
  • Evalue 2.10e-63
Marine sediment metagenome DNA, contig: S01H4_C01573 {ECO:0000313|EMBL:GAG71096.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 473.0
  • Bit_score: 696
  • Evalue 1.60e-197
ribosomal RNA small subunit methyltransferase RsmB similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 510.0
  • Bit_score: 246
  • Evalue 8.70e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 1554
TTGAATGAAAAAAGCAGTAGTATCAATCCCCGCAGAATTACTCTTCTTATATTGAATGAATATTTCAAGAAAAAAAAATCTCTAAAAGACATAATAAACTTTTATTTTAAAAATTACAGGCTATTCGGGCTTGATAAGCGCTTTATTTTCAATATAGTTAAGGGTACAGTAAGGTATTATCTAAAAATTGATTTTTTACTCTCTTTTCTTTCAGATAAAAAAATAAAAGATATCGATTTTGCAGTGCTTAATATTCTCCGTATGGGAATTTTTCAGTTCATGTATATGGATAAGGTTCCGCCTTATTCAATAGTAAATGAAAGTGTGGAATTGGCCAAGAAAAACGTAACTTTATCTTCTTCTAAATTTGTGAATGCAGTACTGCGTAAAGTCAGTTCAATTCCAAACATAGATTCATTTGCAAAAGATAATATTGATAGGTTGGTGAAAGATGAGGTTGATAAAATCAGAATAGATTACTCTTATCCGGGCTGGCTGGTAAAATACTGGTTTGACTGGTACGGGAAAGAAAAGACAATTTTAATCTGTAAGTCGCTGAATGAGAATCCACATATTTATTTAAGGTTTAATAAAAGTAAAATTACAAGGGAAGAGCTGTCTAAAGAGCCAGGCATAAAGTCAATCGATGTAAAACCCCGCAGTCAAAATATCAAAGTCATATATGGACCTATACAGGATAATATTGAAACAAAGGGTAATAATAATAAACAATCCGTATCGCAGGATAATATATTTGAAGGTGCAATAGAGGTTTCCAGCGTCCAGGATATTTCAGAGACTGATGTTTACCGGGAGGGCCTGGTTTCAGTTCAGGATCTCTCATCTCAAATAGCTGTAAAGTGTTTTCTGAGTCCGGAGAAAGGTGAGAAAGTACTGGATGTATGCGCTGCGCCAGGCGGCAAGACTGCCTATATTGCAGAGCTGGTGAAAAATGAGAGTGAAGTAGTATCGGTTGATATCAGCGGAAAAAGGCTGAAAGTATTGCAGGATAATCTGGACAGGTTAAATATAAGGAATGTAAGGATTGTGGAAGCAGATGCAGCAGAACCGGATTTTCTGGAAAGAAAAAGAGATACCGGGAATAATAAGGATTCCGAAAATAAAGGAACAGCTGATAATTATACGGGGTATTTTGATAAAGTTTTAATCGATGCCCCCTGCAGTGCTTTTGGAACCATTTCCAAGAATCCGGATGCAAAATACAATAGGACAATGGATGACTTGGTACGCCTTTCCGAGATGTCCTACAGGATGATGGTAAATTGTGATATTTATCTTAAAACCGGTGGAAAGCTTGTCTTTTATACCTGTACTTTGTCACCCATAGAAAATCAGCAGGTAATTGAAAGATTTTTAGCGGAATTTAAAAGGAGATATACTATAGATAAGAAGGGTATTCCCGATGATTTGATATCGATTTTAAACTCCAAAAAAATTATAATAGGATCAGGAGAAGAAAGCTGTTTGGAGATTATGCCCTATTACTTTGGAAGTGAAGCCGGCTTTGTCTGCAGCCTTTTAAAGAATTCGTAA
PROTEIN sequence
Length: 518
LNEKSSSINPRRITLLILNEYFKKKKSLKDIINFYFKNYRLFGLDKRFIFNIVKGTVRYYLKIDFLLSFLSDKKIKDIDFAVLNILRMGIFQFMYMDKVPPYSIVNESVELAKKNVTLSSSKFVNAVLRKVSSIPNIDSFAKDNIDRLVKDEVDKIRIDYSYPGWLVKYWFDWYGKEKTILICKSLNENPHIYLRFNKSKITREELSKEPGIKSIDVKPRSQNIKVIYGPIQDNIETKGNNNKQSVSQDNIFEGAIEVSSVQDISETDVYREGLVSVQDLSSQIAVKCFLSPEKGEKVLDVCAAPGGKTAYIAELVKNESEVVSVDISGKRLKVLQDNLDRLNIRNVRIVEADAAEPDFLERKRDTGNNKDSENKGTADNYTGYFDKVLIDAPCSAFGTISKNPDAKYNRTMDDLVRLSEMSYRMMVNCDIYLKTGGKLVFYTCTLSPIENQQVIERFLAEFKRRYTIDKKGIPDDLISILNSKKIIIGSGEESCLEIMPYYFGSEAGFVCSLLKNS*