ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3813_c_9

Organism: CG23_combo_of_CG06-09_8_20_14_all_150_Berkelbacteria_40_13_curated

near complete RP 46 / 55 MC: 5 BSCG 47 / 51 ASCG 12 / 38
Location: 5397..5786

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S11 bin=GWC1_CPR2_39_9 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 130.0
  • Bit_score: 164
  • Evalue 5.00e-38
rpsK; 30S ribosomal protein S11 similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 122.0
  • Bit_score: 157
  • Evalue 1.30e-36
Tax=CG_CPR17-01 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 123.0
  • Bit_score: 165
  • Evalue 4.10e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_CPR17-01 → CG_CPR17 → Bacteria

Sequences

DNA sequence
Length: 390
ATGGTTTTTAATAAATCGTCAAAAAAGAGAAAAATTACCAAAATCGTGCCAGAAGGAAAAATTTATATTTATTCCTCTTTTAATAATACGATTGTCACGATAACAGATTTAGAGGGAAATGTCTTATCTTGGGCCTCAGCGGGCTCACTTGGCTTTAAGGGTGCCCAAAAATCTACGCCTTTTGCCTCCCAGCAAGCTGCTTCATCTGCCTTGGAAAAGGCAAAAGTTTATGGATTGCAAAAAGCCGCTGTGTTTATTTCCGGCGTTGGCTCAGGACGCGAATCGGCGGTACGTGTTTTACCAGCTTCTGGTATTAAAATTACCAAGATTCGCGATGTCACACCGATTCCTCACAATGGGCCGCGCGCCAAAAAACCAAGGAGAGTTTAA
PROTEIN sequence
Length: 130
MVFNKSSKKRKITKIVPEGKIYIYSSFNNTIVTITDLEGNVLSWASAGSLGFKGAQKSTPFASQQAASSALEKAKVYGLQKAAVFISGVGSGRESAVRVLPASGIKITKIRDVTPIPHNGPRAKKPRRV*