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ACD40_41_10

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(4953..5276)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 87.0
  • Bit_score: 85
  • Evalue 1.20e-14
NusB (db=HMMPfam db_id=PF01029 from=32 to=100 evalue=7.8e-24 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.80e-24
NusB-like (db=superfamily db_id=SSF48013 from=7 to=101 evalue=2.4e-22 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-22

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 324
ATGAAAACCTCTACCGACCCAAGACACAAAAAACGCGAGGCTCACGTCTCCGCCATGTTCGCCCACAGTTTCGTCCCCAATTTCACGACCCCCGTTGATGCCCTAATCGAATCTGCCGCTCCCGAATGGCCCTTGGATAAAATTAATCGCATTGACCTGGCTATTTTACGCGTTAGCACCGATGAGTTGATGAATAGTAATACTCCCCCCAAGGTGGTAATCGATGAAGCTATCGAAATCGCCAAAAAATATGGAGCCGAATCTACCCCCAGCTTTATCAACGGAGTTCTAGGTACCATTCTGACCAAAAAGGAGCAATTATGA
PROTEIN sequence
Length: 108
MKTSTDPRHKKREAHVSAMFAHSFVPNFTTPVDALIESAAPEWPLDKINRIDLAILRVSTDELMNSNTPPKVVIDEAIEIAKKYGAESTPSFINGVLGTILTKKEQL*