ggKbase home page

ACD40_41_21

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(15876..16238)

Top 3 Functional Annotations

Value Algorithm Source
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 114.0
  • Bit_score: 104
  • Evalue 1.60e-20
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=116 evalue=3.4e-36 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.40e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 363
ATGACCAGAGTCAAAAACAGTCCCGCCAAACGCGCTCGCCACCACGTAGTCCTCAATCGCACCAAGGGCTTCCGCATGTCCAAACATCGCCTGTGGAAAGTTGCCCACGAAGCTTATCTTCATGCGCTTGATTATTCTTTTAAAGGCCGCAAAGATCGCAAATCCAACTTTAGGACATTATGGATTATTCGGATCAATGCTGCCCTCCGTACCCTTGACTCTACATATACCTACGGCAAGTTTATCCATGCCATGACCAAAAAGAATAGTACTCTTGACCGTAAAATCCTGGCCGACCTGGCAGTCACCGATCCAACTACTTTCAAAGTCGTAGTTGACAAAATTCTCTCATCTGGTGTATAG
PROTEIN sequence
Length: 121
MTRVKNSPAKRARHHVVLNRTKGFRMSKHRLWKVAHEAYLHALDYSFKGRKDRKSNFRTLWIIRINAALRTLDSTYTYGKFIHAMTKKNSTLDRKILADLAVTDPTTFKVVVDKILSSGV*