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ACD40_41_8

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(4005..4250)

Top 3 Functional Annotations

Value Algorithm Source
rpsP; 30S ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 74.0
  • Bit_score: 76
  • Evalue 4.20e-12
RIBOSOMAL_S16 (db=PatternScan db_id=PS00732 from=2 to=11 evalue=0.0 interpro_id=IPR020592 interpro_description=Ribosomal protein S16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
S16: ribosomal protein S16 (db=HMMTigr db_id=TIGR00002 from=2 to=79 evalue=1.9e-19 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.90e-19

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Taxonomy

GWA2_OP11_46_16_partial → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 246
ATGCTTAAAATCAAACTCACTCGGATTGGCAAAAAGGGGCAACCACAATATCATGTAGTCGTCATCGAAGATCGCATCAAGCTCAACACCCGCCACATCGCCCGCCTTGGCTATTACAATCCCCTTACTACTCCCCACGAATTTCGCCTTGATCGTGTCTCCTACGACTCTTGGGTTGCCAAAGGTGCAAGACCCACAGACACTATCCGCCAACTCGTGCTCAAATCTACAAAATTACCAAAATAA
PROTEIN sequence
Length: 82
MLKIKLTRIGKKGQPQYHVVVIEDRIKLNTRHIARLGYYNPLTTPHEFRLDRVSYDSWVAKGARPTDTIRQLVLKSTKLPK*