ggKbase home page

ACD40_46_23

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(17267..17875)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 204.0
  • Bit_score: 196
  • Evalue 9.00e-48
seg (db=Seg db_id=seg from=21 to=28) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=202 evalue=1.3e-84 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCAAGATATACTGGTTCTAAAAACAAGAAGGCTCGCCGATTTGGAGTGGATCTTGGCTTAAAATCCTCTAGCAAATCTCTTGATCGTCGGATCGGTACTCCCCCAGGTGCTCATGGCCGGAAAGGTAGTCGGAAAGTCTCTGATTATGGGGTTCAACTGGCCGAGAAACAGAAAACCAAAATTATGTATGGCATTCTGGAGCGTCAATTCAAAAAATACTATACCGAGGCTTCTCGTAATCCTCTAGCTACTGGAGAAGTTATGCTCTCTTTCCTTGAGCGTCGTCTGGATAACTGTGTTTATCGTCTAGGTTTTGTTCCAACTCGCAGTGCCGGTCGTCAAATCGTCGCGCACGGCAACGTTCGCGTCAACGGCAAAAAACTCGATATTCCCTCCTACCAAGTCAAAATTGGAGACGTGATTTCTCTCTCTGATACTGCGCTTAACATCCCCTATATCAAGTCGCGATTGGTTGATAAAGATCTTCCTTGTGCGGCCTGGTTGGAGAAAAAAGCTGCCGTTGGCAAAGTTATCCGCTTCCCGCAAAGAAGCGATCTTATTGAGGCTATTAACGAACAATTAATTGTGGAGTTCTATTCTCGTTAA
PROTEIN sequence
Length: 203
MARYTGSKNKKARRFGVDLGLKSSSKSLDRRIGTPPGAHGRKGSRKVSDYGVQLAEKQKTKIMYGILERQFKKYYTEASRNPLATGEVMLSFLERRLDNCVYRLGFVPTRSAGRQIVAHGNVRVNGKKLDIPSYQVKIGDVISLSDTALNIPYIKSRLVDKDLPCAAWLEKKAAVGKVIRFPQRSDLIEAINEQLIVEFYSR*