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bjp_ig3402_scaffold_23179_1

Organism: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

partial RP 29 / 55 MC: 2 BSCG 27 / 51 ASCG 7 / 38 MC: 1
Location: comp(3..434)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWB2_Nitrospirae_rel_47_37 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 145.0
  • Bit_score: 115
  • Evalue 3.90e-23
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 29.3
  • Coverage: 147.0
  • Bit_score: 67
  • Evalue 2.00e-09
Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 145.0
  • Bit_score: 114
  • Evalue 1.20e-22

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Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 432
ATGAAAGAAACATTCAATTTGGAAGAAGGCTTTAATCAGGAAGACTTTGAAGATAACAAGCTAATTTTTTCTCCCGAAGCGTTTTTTTCTGAACAAGAAGAACTGACCGAAAAAGAAAATCAGACTGGAGCTTTACAGGCTGAATATGACTTTATGAAGGCTTATATGAAAGCGATTGGGATTGCACCGCTTTTGAGCCGGGAAGAGGAGATAGAGATTGCAAAAAAAATTGAGATTTTAAAATCAGAAATAATGGGGATGATTTTTACAACTCCATTTTGCCTTAAAAAGCTCATTTCCCTCGGAGAACTTCTCAAAGATGGTGAAGCTCCTCTTTCGGAACTCATTTGCGATGCAGAAGAACTTGCAAATACTGATTTGTTAAAGGAAAAGAATCGATTAGAAAGGATTATAAAGTCAATCAAAACTCTT
PROTEIN sequence
Length: 144
MKETFNLEEGFNQEDFEDNKLIFSPEAFFSEQEELTEKENQTGALQAEYDFMKAYMKAIGIAPLLSREEEIEIAKKIEILKSEIMGMIFTTPFCLKKLISLGELLKDGEAPLSELICDAEELANTDLLKEKNRLERIIKSIKTL