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gwc1_scaffold_706_15

Organism: GWC1_OD1-like_39_12

near complete RP 42 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17654..18949)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS35746.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 431.0
  • Bit_score: 834
  • Evalue 5.30e-239
sigA; RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 369.0
  • Bit_score: 354
  • Evalue 4.20e-95
ccl:Clocl_2118 RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor alias=RAAC4_OD1_62,RAAC4_OD1_C00001G00062 id=5227550 tax=RAAC4_OD1 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes similarity UNIREF
DB: UNIREF90
  • Identity: 71.2
  • Coverage: null
  • Bit_score: 481
  • Evalue 2.50e-133

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Taxonomy

Parcubacteria bacterium GW2011_GWE2_42_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAAAATAAAAAAATAAAGATAAAAAAAGGTAAAGAGACAAGGCGTAAGCCACGAAAGTCTGCCAAGAAATTGGTAAAAGCCAAAATAAAGGCAAAGAAGACAAAGAGGTTCGTTGTACCAAAGGTAAGAAAGAAAAAGAAAAACAAAACCTCGCTTGCAATGCGTGCTGCGAAAACCGTTGTCCAAAAGAAGGCTCCAGCCATGAAGAAATCTGATAGGCAGGGTGAGGGGATGGTGAGGCTCCTGGCTAAGGGCAAGGAACGTGGCTATGTTACTTATGATGAAATATTAAAAGAGTTTCCCACGGTAGAAGACGACATAATTTTTCTTGATGAATTATACGAAAAGTTGTCTGAAAGTGGCGTGGACATTCTAGAAGGAGGAGGATTGCTTGAGAGCTCATCAAATGAAGACCTTATAAATAAAAAATATGCTTATGGGCGAAACAGTGAGTCTTCCTACGATTCTATCCAGATGTATCTCAAAGAGATTGGTCAATACCAGCTGATTTCTGGAGGGATGGAAAAAGAGCTGGCAAAGCGAATAGAAAAGGGGGACGTTGAGGCCATAAACCTTTTGGCCAGGGCCAACCTTCGTCTTGTGGTTTCTATTGCCAAGAAATATGCAAATCGAAGTCCTGATTTAACTCTGCTTGATTTGATTCAAGAAGGAAACTTAGGATTATTTAAGGCTGTAAGTAAGTTTGACTGGACAAAGGGTTATAAGTTTTCAACCTATGCCACATGGTGGATTCGTCAGGCCATAACCCGTGCCCTGGCAGACCAGTCCAGAACTATTCGTGTACCAGTTCACATGGTGGAGACTATTGCCAAGTATAAACAGGTCGTCAGAAGACTATCGCAAGACTTGGGGAGAGACCCACTACCAGAGGAGATTGCTATTGAAATGAATCTTTCTGTTGATAAGGTATATACAATAGAGAAAATAGACCAAAGCACCCTCTCTCTAGAGAGTCCAATCGGGGAGGATGGGGATGAGAGCAAGAGTAAGCTTGGAGATTTCCTTGCGGACGAGAAGATTCTTTCACCAGAAATGGAGTCATCAAGAAGAATAATATCAGACCAGGTGAAGGAAATATTGAATGACTTACCAGAAAAGGAAAGAAAAATCTTAGAGCTTCGTCATGGACTTGTTGATGGTGTAACACACACGCTTGAAGAAGTGGGCAGGGAGTTTGGTGTGACCCGAGAACGTATAAGACAAATTGAGGCCAAGGCCCATGAAAAGATTAGACAGCATGATAAAATAAATCGCTTACGTAATTATTTCTAG
PROTEIN sequence
Length: 432
MKNKKIKIKKGKETRRKPRKSAKKLVKAKIKAKKTKRFVVPKVRKKKKNKTSLAMRAAKTVVQKKAPAMKKSDRQGEGMVRLLAKGKERGYVTYDEILKEFPTVEDDIIFLDELYEKLSESGVDILEGGGLLESSSNEDLINKKYAYGRNSESSYDSIQMYLKEIGQYQLISGGMEKELAKRIEKGDVEAINLLARANLRLVVSIAKKYANRSPDLTLLDLIQEGNLGLFKAVSKFDWTKGYKFSTYATWWIRQAITRALADQSRTIRVPVHMVETIAKYKQVVRRLSQDLGRDPLPEEIAIEMNLSVDKVYTIEKIDQSTLSLESPIGEDGDESKSKLGDFLADEKILSPEMESSRRIISDQVKEILNDLPEKERKILELRHGLVDGVTHTLEEVGREFGVTRERIRQIEAKAHEKIRQHDKINRLRNYF*