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Ig5181_scaffold_24508_27

Organism: bjp_Ig5181_Hor_194_2015_Spirochaetae_56_12

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(25366..26367)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 322.0
  • Bit_score: 237
  • Evalue 3.40e-60
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:AEF86004.1}; EC=5.4.99.- {ECO:0000313|EMBL:AEF86004.1};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 322.0
  • Bit_score: 237
  • Evalue 1.70e-59
ribosomal large subunit pseudouridine synthase C Tax=Treponema primitia RepID=UPI0002554FDE similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 349.0
  • Bit_score: 259
  • Evalue 3.00e-66

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Taxonomy

Treponema primitia → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAAAGCAGCCTTCAGCCAAACCGTTTCCGCCGATGACGAGGGTCGAAGGCTCGACAGGTTGCTGCGCATCATATTGAAGGAAACAGCGCTCTCGGCCCTGCACAAGGCACTCCGCAAGGGCGAGATCCGCGTCAACGGACTCAGGCGGAAGCCCGATTACCGCTGTCTTGAAGGCGACAGGATTGAGTACAGCCGCGGTATCCTGCCCAGCACCGACTCCGTACCCGATTCCACCGGCAAGCACCCTGTGGAGAACAGCCTCTCGATAGTGCTTGAAACCTCAGACCTCCTCTTCATCAATAAACCCTCAGGACTCCTCGTTCACGATGGTCCAGGAAGCCTCGATGCCCAGGTGAGAGCCTATCTTGCAGACAGGCTGGAAGCGTCGCTCGCCTTCAGGCCTGGCCCATTGCACAGACTGGACAGGAACACGTCGGGTCTTATCACCTTTTCCCGAAGTCTCGCCGGCGCTATGGCTTTCAGCGCCGCCCTACGGCGAGGGGCGGTGCGCAAAACCTATCTCGCCATCGTGGAAGGCAGGCTGGAAAGCGATGAATGCTGGAGGGATTCTCTTTCGAGAGATACAGAACTTCGCCGCAGTTTTGTGGATTCATCCCGTACCTCACCAGACAAGCCAGTCGAAGCCACGGAGGCGAAGGAAGCCATCACAGACATCCATCCCATCGCTTCCAATGGATCCATAACCCTCGCCGCAATACGGCTTCTGACAGGGAGAACCCACCAGATCAGGGCCCAAGGATCCCATCATGGCCACCCCCTCCTCGGCGATACCAAATATGGCGGAACGCGATGCGATCAGCCATATTACCTACATGCGTGGAAACTCTCTTTCGATGAACAGCTCTTCCCCGACCTGCCACGTGAGCTTTCCGCCCCATTTCCTCCACATTTTGATAAAAAAATCCTCTCATCCTTTTCCAACCCGGAAAAAGAAGTATATTTAATACTTAGGAAATTTCGATTCCAGGAGGGGACATAG
PROTEIN sequence
Length: 334
MKAAFSQTVSADDEGRRLDRLLRIILKETALSALHKALRKGEIRVNGLRRKPDYRCLEGDRIEYSRGILPSTDSVPDSTGKHPVENSLSIVLETSDLLFINKPSGLLVHDGPGSLDAQVRAYLADRLEASLAFRPGPLHRLDRNTSGLITFSRSLAGAMAFSAALRRGAVRKTYLAIVEGRLESDECWRDSLSRDTELRRSFVDSSRTSPDKPVEATEAKEAITDIHPIASNGSITLAAIRLLTGRTHQIRAQGSHHGHPLLGDTKYGGTRCDQPYYLHAWKLSFDEQLFPDLPRELSAPFPPHFDKKILSSFSNPEKEVYLILRKFRFQEGT*