ggKbase home page

Ig5181_scaffold_209242_3

Organism: bjp_Ig5181_Hor_194_2015_Planctomycetota_67_5

partial RP 42 / 55 MC: 7 BSCG 40 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: comp(1440..1844)

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain protein bin=GWC2_Methylomirabilis_70_16 species=Synechococcus sp. CB0101 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 135
  • Evalue 3.40e-29
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 135.0
  • Bit_score: 121
  • Evalue 1.10e-25
Tax=CG_Delta_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 133.0
  • Bit_score: 156
  • Evalue 2.60e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_02 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGAGGGCATTTCTTGACACCAACTTCCTGGTCAGTGCGTTTACAGCGCGCGGCTTATGTGCGGAGCTGTATCGCATATTGCTGGCGGAGCACGAAGTCATGACCGGCGAGGTCAACCTCGCGGAATTGCGACGGGTCCTCGCAGAGCATTTCCGGGCATCGGAATCACAATTGGCAATCGTTGAAGGTCAGCTGCGCGATCAACTCATCATCCCTCGCCCGTCGGCACCGAGTTCGTTACCCATCCGCGACTGTGATGACGGATGGGTCCTGGCTTCCGCGATCGCTGGTGCTGCTGAAGTGTTGATCACCGGCGACAAGGACCTGCTCGCAGTTGCGACGATTGCACCGCTTCCAATTCTGACTCCGCGTGAGGCTTGGGAGCGACTTCGCGCGGCTGAATAG
PROTEIN sequence
Length: 135
VRAFLDTNFLVSAFTARGLCAELYRILLAEHEVMTGEVNLAELRRVLAEHFRASESQLAIVEGQLRDQLIIPRPSAPSSLPIRDCDDGWVLASAIAGAAEVLITGDKDLLAVATIAPLPILTPREAWERLRAAE*