ggKbase home page

Ig8144_scaffold_15588_5

Organism: 09V250M02_Ig8144_Hor_250_2016_Firmicutes_33_10

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 4 ASCG 14 / 38 MC: 5
Location: comp(3280..3732)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein RfbH Tax=Clostridium sp. CAG:632 RepID=R5KE29_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 150.0
  • Bit_score: 211
  • Evalue 4.20e-52
Dehydratase {ECO:0000313|EMBL:KEZ91303.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 150.0
  • Bit_score: 212
  • Evalue 3.40e-52
rfbH; lipopolysaccharide biosynthesis protein RfbH similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 150.0
  • Bit_score: 208
  • Evalue 7.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] celerecrescens → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 453
AATTTAAAAGTTACTGATATGCAGGCAGCAGTTGGTTGTTCTCAATTACTAAAATTACCAGACTTTATTGAACGTCGACGCAATAATTTTAAATTGCTTTACGAAAGACTCATCCCTCTTTCTGAAAAGATTATTCTTCCTGAAGCATGCCCAAATTCTAAGCCGAGTTGGTTTGGTTTCTTAATCACCTGTAAGGAAAATATTGACAGGAAACTTTTAGTAAACCAATTGGAATCTCGTGGAATTCAAACTCGTTCATTATTTGCCGGGAACTTATTAATGCATCCTTGCTTTGATAATATGAGAGATTCAGGAGAAGGATTTAGAGTGATTGGTAATTTAGAAAATACGAATAAGATAATGAACCAGACTTTTTGGATTGGGGTTTATCCAGGATTAACGACGGATATGATCGATTATGTTGCCAATTCCATAACTGAAATATTAAAATAA
PROTEIN sequence
Length: 151
NLKVTDMQAAVGCSQLLKLPDFIERRRNNFKLLYERLIPLSEKIILPEACPNSKPSWFGFLITCKENIDRKLLVNQLESRGIQTRSLFAGNLLMHPCFDNMRDSGEGFRVIGNLENTNKIMNQTFWIGVYPGLTTDMIDYVANSITEILK*