ggKbase home page

js4906-25-3_S22_scaffold_27_25

Organism: js4906-25-3_S22_Melainabacteria_curated_33_82

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 22793..23752

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Clostridium sp. CAG:967 RepID=R5KSH8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 290.0
  • Bit_score: 394
  • Evalue 7.40e-107
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 290.0
  • Bit_score: 394
  • Evalue 1.00e-106
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 314.0
  • Bit_score: 268
  • Evalue 1.30e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:967 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGAGTAATTTAAAGAGTTGTAGTGCTGTTTTAATTGACGAAAAATGGGATGATTTTGATTTTAGAGCTACAGAAGATGAAACTTTAGAAGAAGAACCAAAAACTTTCAGTTGCATTGCAAAAGAAGATGATTTGCTTCAAATGTATTTAAAAGATATAGGCAAAACTAAACTGTTAAGCTCAAAAGACGAATTGTTTTTAGGAAAAAATATAAAAGAGGGAGCTCCACAAGACGCATTAAAAGCCAAGAAAAAACTTGTACAGGCAAACTTACGACTTGTAATTAGTATTGCTAAAAGATATGTAGGACAGGGCGTTTTATTTATGGATTTGGTTCAAGAAGGTTCAATAGGACTTATTAGAGCAGCTGAAAAATTTGATTACACAAAAGCCTTCAAGTTTTCAACTTACGCAACTTGGTGGATAAAACAAACAATTATAAGGGCTATTTCAAACTACTCACGTTCAATAAGAATCCCAGTACACATGACCGACAAAATTAGAAAATATAAGAAAGCAGTACTTGATTTAACTTTTGAACTAAATCGTGAACCAAGTGAAAAAGAAATAGCTGAAAGAATGGAAATAAGTGTTAAAAGAGTTCAAAGTATAAAAAGAGCAATAATGAAAGAGCCAATAAGCCTTGATACACCAGTAACTGACGACTTAAATGTTCAAGATTATATTGCAGATTTAAGCTATAAAGCACCAGAAGAACAGGCTCAGAGTGTAAATTTAAAAGATTGTATGCCTTTTTTAATGCGACAACTTGAGGAACGGGAACGACAAATTTTAATTCACCGTTTTGGACTTGAAGGTACTAGACCAAAGACACTTGAAGAATTAGGTAAAATATTAGGATTTTCAAAAGAACGAATTAGGCAGTTAGAAGATTTGGCTATAAACAAAATAAGAAGTAACGAAAAAACATATTTATTTCATAGTTTTTTAGAGGATTAA
PROTEIN sequence
Length: 320
MSNLKSCSAVLIDEKWDDFDFRATEDETLEEEPKTFSCIAKEDDLLQMYLKDIGKTKLLSSKDELFLGKNIKEGAPQDALKAKKKLVQANLRLVISIAKRYVGQGVLFMDLVQEGSIGLIRAAEKFDYTKAFKFSTYATWWIKQTIIRAISNYSRSIRIPVHMTDKIRKYKKAVLDLTFELNREPSEKEIAERMEISVKRVQSIKRAIMKEPISLDTPVTDDLNVQDYIADLSYKAPEEQAQSVNLKDCMPFLMRQLEERERQILIHRFGLEGTRPKTLEELGKILGFSKERIRQLEDLAINKIRSNEKTYLFHSFLED*