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js4906-25-3_S22_scaffold_491_3

Organism: js4906-25-3_S22_Melainabacteria_curated_33_82

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(1466..4825)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 1111.0
  • Bit_score: 1659
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Clostridium sp. CAG:768 RepID=R7I0J1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 1111.0
  • Bit_score: 1659
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 1149.0
  • Bit_score: 818
  • Evalue 1.60e-234

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Taxonomy

Clostridium sp. CAG:768 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 3360
ATGTTAAATTTTGACTGCAAAACTTTTTCTCGTCTACAAAACTATATAGCAAAGAAAAAATCCTTTGCTGTAAGTGGATTAACGTCTTTTTTTAGATTGATTTTGTTAGACAAAATTGTCGAATTTTCCGGTAAAAAGATTTTGTTTGTAACTTCAAATGAGCAAAGTGCTTTGAAGTATCAATCTGATTATAAAAAAGTTTTTGCTAAATCTTCTGTGTTGTTGCCATTTCAAACTATTTCTATGTATGAAGGTGTAAATTCAAACAAATATGAATATGCAAAACAAGTTGAAATCCTACGAAGCAAACCAAAAATTGTGTTTACACCAATAAAAACTTTGCTTGAAAAATTTCCAGAAGAAAAATTCTTTAAACAAAATGCTATTGAGATAAAATTGAATGAAAATTTAGATATCCAAACTTTGGCTAAAAAACTTGTAGAATTTGGCTATAAGCGTTCAGTAATGGTTTCTGATGTTGGGGAATTTTCTATTCGTGGTGATATTATTGACATTTTTTCTTTAGAGGAATACCCTGTGCGAATTGAGTTATGGGGTGATGAGATTGTTGATATAAGATTATTTAATAATGAAACTCAAAAATCTATTAAAAAGATTGAAAAAGCTACTATTTTACCTATTTACAAATTTATTTCAAGCGAAAATGTTAAAATGCCGAAAGAACTTTTGAATATGGTTCAAGAGGATAATTATTTTGAAGGTATTGAGGTTTATCAATCTTACTTTAATGATAAATTAATAAGTATTTTTGATTATTTTAAAGACTATATAATTATATTTGATGAAGCTAGTGAAATTTACTCAAAATATCAATTCTTAGATGAAAGTTATACAAATCAGGAGGCAGAAAACTTAAAATTAGCTCTAAATTATGAGTTAAAGGATAAAAATCATATATTATATGAAGATTTTATTCAACTGATTGCGCCATTTGTTAAAATTGGAATGAACAACTTTATTGACAGCGAATTTGAAGATGTTATCGAATTTGATGCTCAACCTGTTAAAAATTTTAATGCAAATATTGCTGAAATTACCAAATATATTAAAGAGTATGAGTCTTATAAGGTTTTAATCTCTACGGATTATCCGGAAAGAGTCAGAGAAATTTTAGCTGAAAATGAAATTTTTGACTGTACTTTTTTAGAAAGTTTAACTTCGTTTGGTACAATTTCAGATGAATGTAAATTTTTATTGTTGACGGATAGAGAGTTATTTAATAAGCGCTCAAAAGAAATTACTTCTTCAAAGAAAAATTATTATAAAGAAAAGGCTGAATATATCGAAAGTATAAATGATATTCAAGCTGGAGAGTACGTTGTTCATACAATTCATGGGGTTGGAATTTATCAAGGATTAACGCAACAAGAAATCGACGGTCAACTAAAGGACTACTTAACGATTGAATACGCAGGAAAAGACAAATTACATATTCCAGCAGAGCAAATTAACTTATTGTGCCGTTATAGGGGTTCTGGTTCAGTAAAACCTAAATTATCACGAATGGGTGGTAATGATTGGGAAAATACTAAAAATAAAGTTAAAAAAGCTGTTGAAACTATTGCTTATGACTTGTTACGTCTTTATGCAAAGCGTAAAATGCGTAAGGGCATTCAGTTTGATGCAGATTCAAATTGGCAAATAGAAATGGAGGAAGCCTTTGAGTATGTCGAAACTCCAGATCAAATGCGTGCAATTGAAGATGTTAAACGAGATATGGAATCTGAAAATCCAATGGATAGATTAATTTGCGGTGATGTTGGATTTGGTAAAACAGAAGTTGCGATGCGTGCAATTTTTAAGGCAATAACTTCAGGCAAGCAAGTTGCAGTAATTGTACCAACAACTATTTTAGCTCTTCAACACTATCAAACGATTTCCGAACGTTTTAAACCATTTGCAATGAATGTTGACTTGTTGTGTCGTTTTAGAAGCGCAAAAGAGCAAAGAGAAACATTAAAGAGAATGGCATTAGGCGAATGTGATGTCGTAATTGGTACACATAGGTTACTTCAAGATGGTATTCAGTTTAAGGATTTAGGTTTACTTGTTATAGACGAGGAACATAGATTTGGAGTTCGTCATAAAGAAAAATTGAAGCAATTGCGTGAAAATATTGATATTGTTTCAATGTCGGCAACTCCAATTCCGAGAACTCTTTATATGTCTTTATCTGGCATAAAAGACATGTCTATAATTAATACTCCGCCAAAGAATAGACTTCCTGTTAAAACCTTTGTAGGAGAAGAAAATGATACGGCAATAAGAAACGCAATCGTACACGAATTGGATAGAGAAGGACAAGTTTTTTATCTATATAATAGAGTTGAAACTATTGAAGAATTTAAACTTCATCTTCAAAAAATAGTTCCTAATGCTAGAATTTGTGTTGGACATGGCAAAATGAATGAGGCAGAACTTGAAAAGGTTATGGTAGATTTTGCAAACTATGAATATGACGTATTGCTTTCAACTACTATTATTGAGTCAGGTTTAGATATTCCAAATGCAAATACTATAATTATACATGATGCAGATAAATTTGGTTTAGCTCAATTGTATCAATTGCGAGGTCGTGTTGGTCGTTGTGAAAAACAAGCCTACTGCTATTGTTTTTATAAGCATAACAAAAATTTAACAGAAGAAGCTACAAAACGATTGAAGGCAATTAAAGAGTTTACAACACTCGGTAGTGGGTATCAAATCGCATTAAGAGATGTAGAAATTCGTGGTGTAGGTAACTTGTTAGGTACAAAACAACATGGACACATGATAAATGTTGGTTTTGATACATATTGCCAATTATTAGAGGATACAATTCACGAAATTCAAGGTGAAAAAGTTGAAAATGTGACTCCTACAATTGTTGATATTAATGTTACTGCATATATTCCAGATGAATGGGTTGGTTCAAGTGAACAAAAGATGATTGAATACAAACGCTTAGCTGATGTAAAATCAACCGTCGAACTAGATTATATCGTAGATGAATGGAAAGATAGATTTGCAAAATCTCCAGAACCAGTTGAAAATTTAATTAAGTTGATAAAATTAAGACTTTCTGCAACAGAGGCAAAAATATCAGTAATTAGAGAAACACAAGATTGTATAAGAATTTATACACCATATTCAATGCCAGAATGGAGAATTATTAGTGCAAAATTGCCGTCAAATATTACAAAAAGTATTAAGTTTACTGTTGCGCCTAAGGCTTGTACAGAGGGAAATTCTATCATTTTGCTTAACAATAAGTATATGAATTTTAATGAAATATTTAACATTTTGACGGATTTGTTTTATTATATTAATAAAATTTGTTACGAGTACAAAGACAAATAA
PROTEIN sequence
Length: 1120
MLNFDCKTFSRLQNYIAKKKSFAVSGLTSFFRLILLDKIVEFSGKKILFVTSNEQSALKYQSDYKKVFAKSSVLLPFQTISMYEGVNSNKYEYAKQVEILRSKPKIVFTPIKTLLEKFPEEKFFKQNAIEIKLNENLDIQTLAKKLVEFGYKRSVMVSDVGEFSIRGDIIDIFSLEEYPVRIELWGDEIVDIRLFNNETQKSIKKIEKATILPIYKFISSENVKMPKELLNMVQEDNYFEGIEVYQSYFNDKLISIFDYFKDYIIIFDEASEIYSKYQFLDESYTNQEAENLKLALNYELKDKNHILYEDFIQLIAPFVKIGMNNFIDSEFEDVIEFDAQPVKNFNANIAEITKYIKEYESYKVLISTDYPERVREILAENEIFDCTFLESLTSFGTISDECKFLLLTDRELFNKRSKEITSSKKNYYKEKAEYIESINDIQAGEYVVHTIHGVGIYQGLTQQEIDGQLKDYLTIEYAGKDKLHIPAEQINLLCRYRGSGSVKPKLSRMGGNDWENTKNKVKKAVETIAYDLLRLYAKRKMRKGIQFDADSNWQIEMEEAFEYVETPDQMRAIEDVKRDMESENPMDRLICGDVGFGKTEVAMRAIFKAITSGKQVAVIVPTTILALQHYQTISERFKPFAMNVDLLCRFRSAKEQRETLKRMALGECDVVIGTHRLLQDGIQFKDLGLLVIDEEHRFGVRHKEKLKQLRENIDIVSMSATPIPRTLYMSLSGIKDMSIINTPPKNRLPVKTFVGEENDTAIRNAIVHELDREGQVFYLYNRVETIEEFKLHLQKIVPNARICVGHGKMNEAELEKVMVDFANYEYDVLLSTTIIESGLDIPNANTIIIHDADKFGLAQLYQLRGRVGRCEKQAYCYCFYKHNKNLTEEATKRLKAIKEFTTLGSGYQIALRDVEIRGVGNLLGTKQHGHMINVGFDTYCQLLEDTIHEIQGEKVENVTPTIVDINVTAYIPDEWVGSSEQKMIEYKRLADVKSTVELDYIVDEWKDRFAKSPEPVENLIKLIKLRLSATEAKISVIRETQDCIRIYTPYSMPEWRIISAKLPSNITKSIKFTVAPKACTEGNSIILLNNKYMNFNEIFNILTDLFYYINKICYEYKDK*