ggKbase home page

ACD41_21_8

Organism: ACD41

megabin RP 44 / 55 MC: 20 BSCG 41 / 51 MC: 16 ASCG 0 / 38
Location: 3632..4330

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 233.0
  • Bit_score: 215
  • Evalue 2.20e-53
no description (db=HMMSmart db_id=SM00662 from=18 to=226 evalue=8.9e-69 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.90e-69
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=18 to=232 evalue=3.8e-66 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 699
ATGGATATACAACTTCCTAGTCAAATCCAAGCGCAAGTGGTTGAACCAAACCATGCTTTATTTACCATTTCACCGTGCTACCCTGGTTATGGCACAACCCTAGGCAATGCGTTGCGTCGCGTATTGTTATCATCCTTGCCGGGCGGCGCTATTACTGCCGTCAAAATTAAAGGTGTGGATCATGAATTTTCCACAGTGGAGCACATTAAAGAAGATGTGGTCGATATTTTGCTGAACTTAAAACAAGTCCGCTTGAAAGTATTTTCGGATGAAGCGGTTCAACTCACGTTATCCATCAGCGGTAAGAAAAAAGTCACCGCCAAAGATTTTGAAAAGAATTCAGATGTAGAAGTGATGACGCCAGAGGTGCATATCGCCACACTTACGGACGCCTCGGCTAAACTGGAAATTACCGTTGTGGCACAAAAAGGTCGTGGCTATGTTCCAGTTGAAGCACGCGAAAACGAGAAGCTGGATGTGGGCTATATGGCATTAGATGCCGTCTACACCCCAGTGCGTAATGTCAATTTCAAAACGGAACATGTTCGGGTTGAACAGATGACAAACTTCGATAAACTGTTAATGGATGTCACTACGGACGGCACGATTAGTCCGGAAATTGCCATGAACCAAGCCTGCCAGATTCTGGTGGATCACTTTGCTCAAATCGGTAACGCCTTTACCAATGCGACATCATAA
PROTEIN sequence
Length: 233
MDIQLPSQIQAQVVEPNHALFTISPCYPGYGTTLGNALRRVLLSSLPGGAITAVKIKGVDHEFSTVEHIKEDVVDILLNLKQVRLKVFSDEAVQLTLSISGKKKVTAKDFEKNSDVEVMTPEVHIATLTDASAKLEITVVAQKGRGYVPVEARENEKLDVGYMALDAVYTPVRNVNFKTEHVRVEQMTNFDKLLMDVTTDGTISPEIAMNQACQILVDHFAQIGNAFTNATS*