Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
Transcription elongation factor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJR5_9FIRM (db=UNIREF evalue=3.0e-36 bit_score=154.0 identity=49.36 coverage=98.7179487179487) | similarity |
UNIREF
DB: UNIREF |
49.36 | 98.72 | 154 | 3.00e-36 | tmr:Tmar_0144 |
transcription elongation factor GreA | similarity |
KEGG
DB: KEGG |
49.0 | 155.0 | 154 | 2.30e-35 | tmr:Tmar_0144 |
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tmr:Tmar_0144 |
greA: transcription elongation factor GreA (db=HMMTigr db_id=TIGR01462 from=7 to=155 evalue=8.2e-54 interpro_id=IPR006359 interpro_description=Transcription elongation factor GreA GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 8.20e-54 | tmr:Tmar_0144 |
GreA_GreB_N (db=HMMPfam db_id=PF03449 from=3 to=74 evalue=2.9e-23 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.90e-23 | tmr:Tmar_0144 |
GreA transcript cleavage protein, N-terminal domain (db=superfamily db_id=SSF46557 from=4 to=81 evalue=1.0e-22 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.00e-22 | tmr:Tmar_0144 |
GreA_GreB (db=HMMPfam db_id=PF01272 from=83 to=154 evalue=1.7e-20 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.70e-20 | tmr:Tmar_0144 |
no description (db=Gene3D db_id=G3DSA:1.10.287.180 from=3 to=77 evalue=6.9e-20 interpro_id=IPR022691 interpro_description=Transcription elongation factor, GreA/GreB, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.90e-20 | tmr:Tmar_0144 |
FKBP-like (db=superfamily db_id=SSF54534 from=80 to=154 evalue=7.9e-18) | iprscan |
interpro
DB: superfamily |
null | null | null | 7.90e-18 | tmr:Tmar_0144 |
GreA_GreB (db=HAMAP db_id=MF_00105 from=3 to=155 evalue=21.271) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.13e+01 | tmr:Tmar_0144 |
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=77133 species="Bacteria; environmental samples.;" sourc |
UNIPROT
DB: UniProtKB |
100.0 | 155.0 | 300 | 1.70e-78 | K2CVG1_9BACT |