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gwa1_scaffold_812_29

Organism: GWA1_OD1_60_11_partial

partial RP 29 / 55 BSCG 31 / 51 ASCG 3 / 38
Location: 24715..25266

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_OD1_60_15_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 365
  • Evalue 5.00e-98
ECF subfamily RNA polymerase, sigma-24 subunit KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 173.0
  • Bit_score: 132
  • Evalue 1.40e-28
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 131
  • Evalue 1.00e+00

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Taxonomy

RLO_OD1_60_15 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGTAGATGGCGAAGAAAAGTTAATTGGACGCGCCATAGTGGGTGAGTCCTCTGCCTTCGGCCTCCTCTACGACGGATACCAGCCGAAAATCTATCGGTTCATCCTCGTGAAGGTCGGCCACCGTGAGGAGGCAGAGGACCTCACTCACCAAGTGTTTTTGAAAGCTTGGCAGAACATCGGGGCGTACCAAGAGCGAGGGATTCCCTTCTCGGGATGGCTGTACCAGATCGCGCGGAACCAGGTCATCGACCACTACCGCACGAAAAAAGTGCACGCCTCGCTCGACCTCCTCGAGGACGAGATCCCTTCGGAAGAGCGGCTTGAGCACGCGCTCGAGTCGACATTTTCCCTCGAACAGGTCCGGAAGGTCATGAAACAGCTCACGCCGGACCAGGAAGACGTGCTTTTGATGCGTTTTGTGGACGACCTCTCCATCAAGGATGTCGCAAAGACGATTAAAAAGAGCGAGGGTGCGGTCAAGCTCCTCCAGTACCGGGCCATCGAGAAACTCAAGGACCTCCTAGACACCGAACACAACGACAATGGATAA
PROTEIN sequence
Length: 184
MVDGEEKLIGRAIVGESSAFGLLYDGYQPKIYRFILVKVGHREEAEDLTHQVFLKAWQNIGAYQERGIPFSGWLYQIARNQVIDHYRTKKVHASLDLLEDEIPSEERLEHALESTFSLEQVRKVMKQLTPDQEDVLLMRFVDDLSIKDVAKTIKKSEGAVKLLQYRAIEKLKDLLDTEHNDNG*