ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

OR_07182017_23_scaffold_1020_1

Organism: OR_07182017_23_Bacteroidetes_38_5

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 4 ASCG 12 / 38
Location: 2..1093

Top 3 Functional Annotations

Value Algorithm Source
alpha-galactosidase (EC:3.2.1.22) similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 362.0
  • Bit_score: 570
  • Evalue 1.90e-160
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 362.0
  • Bit_score: 570
  • Evalue 9.20e-160
Alpha-galactosidase Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1U1_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 362.0
  • Bit_score: 570
  • Evalue 6.50e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1092
AGAGACCATGGTTGGTCTTATGTTAACATTGATGATAGTTGGCAGGGCATTAGATCTGGTCCAGATACGGCATTGCAACCCAATGACAAATTTCCTGACATGAAAGGGATGGTGAATCAAATTCATGCCATGGGCTTAAAAGCTGGCTTGTATTCTACCCCCTATATTTCTAGTTATGGAGGTTATCCTGGTGCTTCAACTGATCTGCCATTGGGTGGTGAAACCAGAGAAATGATTATGAAAAATAATCAGAGTTTTCACAAAATGGGTAAATACCAATATGAGAAAAATGATGCCAGACAAATGGCAGCTTGGGGTTTTGATTTTCTGAAATATGATTGGCGTATTGATGTGGCATCTACAGAAAGAATGGCCACCGCTTTAAAGTTATCAGGTAGGGATATGGTATTGAGTTTATCCAATAATGCGCCTTTTGAAAAAGTAACGGATTGGGTAAGGTTATCTCAAATGTATAGAACAGGTCCAGATATCAAAGACAGTTGGAGTAGTTTGTTCCCCACCAGTTTTTCTTTGGATAAATGGGCACCTTATTCAGGACACGGACATTGGATGGATCCAGACATGATGATTGTAGGTGACGTTTCCATTGGCCCAGTATTGCATCCTACACGCTTAACGCCTGATGAACAATATAGCCATATTAGTATTTTTAGTTTGTTGGCAGCACCCATGTTAATTGGATGCCCTGTAGAACGCTTGGATGCATTTACATTGAATCTTTTGACCAATGATGAAGTAATAGCGGTAAACCAAGACCCACTAGGAAAAGCAGGAAGATTGGTAAAGAATGATTCTTTGGTTCAGGTTTGGTTAAAGCCTTTGGAAGATGGTTCCTATGCCGTAGGATTATTCAATATTGCCGGTTATGGCACTACACCTACTTCTTATTTTAGAATGGGCAATGAGCCTCCCATTAATTATCAATTTGATTTTGCTGCTCTAGGGTTAAAGGGGAAATGGAAGTTCAGAGATCTTTGGCGTCAAAAAAACCTAGGTGTTTTTAGTGGAATTCTTTCTACCAATATACCTTATCATGGAGTGAATATGTACCAATTAGTACCAGTTAAATAA
PROTEIN sequence
Length: 364
RDHGWSYVNIDDSWQGIRSGPDTALQPNDKFPDMKGMVNQIHAMGLKAGLYSTPYISSYGGYPGASTDLPLGGETREMIMKNNQSFHKMGKYQYEKNDARQMAAWGFDFLKYDWRIDVASTERMATALKLSGRDMVLSLSNNAPFEKVTDWVRLSQMYRTGPDIKDSWSSLFPTSFSLDKWAPYSGHGHWMDPDMMIVGDVSIGPVLHPTRLTPDEQYSHISIFSLLAAPMLIGCPVERLDAFTLNLLTNDEVIAVNQDPLGKAGRLVKNDSLVQVWLKPLEDGSYAVGLFNIAGYGTTPTSYFRMGNEPPINYQFDFAALGLKGKWKFRDLWRQKNLGVFSGILSTNIPYHGVNMYQLVPVK*