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ACD42_6_10

Organism: ACD42

partial RP 36 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: 7845..8261

Top 3 Functional Annotations

Value Algorithm Source
GerE (db=HMMPfam db_id=PF00196 from=65 to=116 evalue=6.8e-13 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.80e-13
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=43 to=129 evalue=1.6e-12 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: r iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-12
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=54 to=127 evalue=9.4e-10 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.40e-10

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Taxonomy

R_Gammaproteobacteria_39_13 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCAGTATTGGCATTCCGTTATCGATGAGGTGTTGCATAAAGACGAACAAGCGCGCTCATTTTTTTTCACCAATCACGGTCGACTGGGTGATATTTTTGAAGATAATCATCCGCGAGCCACTATTTTAGTTTCAAGAAAATGTAAAGATGGACGTATTTATGCATTGGGGAAAAAATTTCCTGAGTTGTATCTTACTCGACGTGAAGCAGAAACCATGTTTTGGGTCGTGCAAGATTTTACATTAGCCTATGTAGCGCAACAAATGACTTTATCTCGACGTACCGTTGAATTTTATGTGAAAAATTTAAAATTAAAATTACAGTGTCGAAATAAAAAAGAATTAATTGAAACAATATTGCAAACGGATTTGCTGCGACAGTTGGAGTTGGAGGGGTTGCAGATTATGAGGCATTGA
PROTEIN sequence
Length: 139
MQYWHSVIDEVLHKDEQARSFFFTNHGRLGDIFEDNHPRATILVSRKCKDGRIYALGKKFPELYLTRREAETMFWVVQDFTLAYVAQQMTLSRRTVEFYVKNLKLKLQCRNKKELIETILQTDLLRQLELEGLQIMRH*