ggKbase home page

ACD42_12_4

Organism: ACD42

partial RP 36 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: 3226..3948

Top 3 Functional Annotations

Value Algorithm Source
16S ribosomal RNA methyltransferase RsmE similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 242.0
  • Bit_score: 204
  • Evalue 3.90e-50
Methyltrans_RNA (db=HMMPfam db_id=PF04452 from=19 to=234 evalue=4.8e-70 interpro_id=IPR006700 interpro_description=Ribosomal RNA small subunit methyltransferase E GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-70
TIGR00046: RNA methyltransferase, RsmE fami (db=HMMTigr db_id=TIGR00046 from=1 to=240 evalue=7.2e-63 interpro_id=IPR006700 interpro_description=Ribosomal RNA small subunit methyltransferase E GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.20e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_42_43 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAGACGCATTCGACTTTACCATCCTCATCATTTAACCACCGGCTTGACGGTGATGCTTGAAAAAAATGCGAGCCATCATCTGTTGCAAGTGTTACGAAAAAAAACGGGCGATACATTATTTGTTTTTAATGAGAAGGATGGTGAATATGATGCCACCATCCAGTCCGAACAAAAAAAAATTGCATGCATCGAAATTGGAAAATATCACGAACGAAAAACAGAATCACCATTGCGCATTCATTTGGGACAAGGGATTTCGCGCTCCGATCGCATGGATTATGCGATTCAAAAAGCAACGGAATTGGGTGTTGCAGAAATCACACCACTCTTCAGCGAATTTTGCCAAGTGCAATTATCCGCCGAACGCATGGAAAAAAGAATTGCACATTGGCAAGCGATCACTGTTTCTGCGGCCGAACAATCAGGGCGCTGTGCGGTGCCTGTTGTGCATCCCGTTATGCCATTTTCAGAATGGATAACACAAAACGAAAAAATAAAATTTATTTGCTGTCCGCGTCCAACAGAGCAAAACATGTTGTCAGAAAAAATAAAAAACTGCCTACTTACCATTGGCCCGGAAGGTGGTTTTAGTCAAGCAGAAATAGAGAACGCATTGCAGCAAAATTTTTCGATATTATCATTAGGCCCTCGTATTTTGCGCACAGAAACCGCAACCGTTGTTGCGATGACGGTGTTGCAGAGTTGGTGCGGGGATTTATAA
PROTEIN sequence
Length: 241
MRRIRLYHPHHLTTGLTVMLEKNASHHLLQVLRKKTGDTLFVFNEKDGEYDATIQSEQKKIACIEIGKYHERKTESPLRIHLGQGISRSDRMDYAIQKATELGVAEITPLFSEFCQVQLSAERMEKRIAHWQAITVSAAEQSGRCAVPVVHPVMPFSEWITQNEKIKFICCPRPTEQNMLSEKIKNCLLTIGPEGGFSQAEIENALQQNFSILSLGPRILRTETATVVAMTVLQSWCGDL*