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ACD42_42_1

Organism: ACD42

partial RP 36 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: comp(3..674)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C3E8_NITHN (db=UNIREF evalue=4.0e-56 bit_score=221.0 identity=46.12 coverage=99.5535714285714) similarity UNIREF
DB: UNIREF
  • Identity: 46.12
  • Coverage: 99.55
  • Bit_score: 221
  • Evalue 4.00e-56
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 232.0
  • Bit_score: 214
  • Evalue 3.50e-53
DAP_EPIMERASE (db=PatternScan db_id=PS01326 from=66 to=80 evalue=0.0 interpro_id=IPR018510 interpro_description=Diaminopimelate epimerase, active site GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: diaminopimelate epimerase activity (GO:0008837), Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

R_Gammaproteobacteria_42_43 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGACAATTTTATTCACAAAAATGCAAGCGTTGGGTAATGATTTTGTGGTGATGAATACGTTGTCGCAATCTGTTTCTACCCACCCCGCCTTTATGCGCTATTTAGCAGATCGTCGCACAGGTGTGGGGTGCGATCAAGTGTTACTCATCACAAAACCCTGGAGCGATCGCGCCGACTTTGGTTATCGCATATTCAATGCCGATGGTTCTGAAGTGTATCAATGTGGCAATGGCGCACGCTGTATCGCGTTGCTTATTCACGAGGAAAAAATATCTTCGAAAAAATCCCTGGTGCTGGAAACAAAAAAAGCGCTACTGAAAACACAATATCATTCTCGCGACGCCATTGAAGTGAATATGGGAAAACCTGATTTTAATTTTGAAAGTTTGCCGTTTTTGGAAAAGAAATTTGAAGAAAAATCGTTACCGTTTTTTTTAGTGAGTGTTGGTAACCCACATTGCGTTTTTGTAGCGGATATTATTCAAGAGACAGCGTTAACGAAGATGGGTGAAACATTAAATCAACATCCCGCATTTCCAGAAGGCGTGAATGTGGGTTTTATGAAAATTCATTCATCTGATACCGTTGATCTTTGCGTGTATGAGCGCGGTGCTGGATTAACGAAAGCATGTGGCAGTGGTGCTACCGCAGCTGTAGCGATTGGTCAGAGG
PROTEIN sequence
Length: 224
MTILFTKMQALGNDFVVMNTLSQSVSTHPAFMRYLADRRTGVGCDQVLLITKPWSDRADFGYRIFNADGSEVYQCGNGARCIALLIHEEKISSKKSLVLETKKALLKTQYHSRDAIEVNMGKPDFNFESLPFLEKKFEEKSLPFFLVSVGNPHCVFVADIIQETALTKMGETLNQHPAFPEGVNVGFMKIHSSDTVDLCVYERGAGLTKACGSGATAAVAIGQR