ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_2839_17

Organism: PLM4_65_b1_sep16_Methylomirabilis_oxyfera_65_27

near complete RP 53 / 55 BSCG 51 / 51 ASCG 10 / 38
Location: 16472..17005

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus transmembrane protein FimT bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 165.0
  • Bit_score: 123
  • Evalue 1.30e-25
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 176.0
  • Bit_score: 209
  • Evalue 2.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 534
ATGGCTGGATTCGGACGCTCCAAGAGTACCCAGCGTCAGGTGAAGCGGTCCCGGGGCGTTACGTTCGTAGAGATGTTGTCCCTAATCGTCGTGCTGTTGATCCTGGTCGCTATTGCCATCCCCAAGGTGAGCCCCGTGCTTCAATGGTTCCGTCTCCGTGGGTCGGCCTGGCAATTGGCGGGAGACTTGCGATTGGCCCGCCAGCGGGCGGTGACGCTCCAAAAACGCTTCCGCATTTGCCTCACAAACTGTGCGATTACCGTGCCCGCCGGCAGCTACAGCCTGGAGCGGGACAATGGGACCCCGTTTTCCTCCCAGTGGGTCAGCGAGACCGGTGCCACGATCAGGCTCCCCGGCCCCACGCCCAGGCTTCCCTCGGATGTCACCATCAGCGCCACGGCCTCGGCAGCGACCTTCAACCAGACGGGGATTGCGAGCGGGGCCACCTTCACCCTCACCAACCTGCTCGGTACATACGAGGTCAGAGTCGCTTCCACGGGTCGGGTCATCGTGTGTCAGGGGACGTGTCCCTGA
PROTEIN sequence
Length: 178
MAGFGRSKSTQRQVKRSRGVTFVEMLSLIVVLLILVAIAIPKVSPVLQWFRLRGSAWQLAGDLRLARQRAVTLQKRFRICLTNCAITVPAGSYSLERDNGTPFSSQWVSETGATIRLPGPTPRLPSDVTISATASAATFNQTGIASGATFTLTNLLGTYEVRVASTGRVIVCQGTCP*