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PLM4_65_b1_redo_sep16_scaffold_18861_2

Organism: PLM4_65_b1_sep16_Methylomirabilis_oxyfera_65_27

near complete RP 53 / 55 BSCG 51 / 51 ASCG 10 / 38
Location: comp(588..1115)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin7_NC10_sister species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 172.0
  • Bit_score: 177
  • Evalue 5.90e-42
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 174.0
  • Bit_score: 150
  • Evalue 2.90e-34
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 176.0
  • Bit_score: 276
  • Evalue 1.70e-71

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Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 528
ATGGACCACGTCAAGAGCGAGTTGCCCGCTGAGGCACTGAGCCATCTCGACGCCCTCTACAACCTGGCGCGCTGGCTGGCCCGCGACCCGGCCGAAGCGGAGGATCTGGTCCAGGAGACCTACCTGCGCGCCATTCGGGCGGCTCATCAGTTCCAGCCTGGAACCAATCTCCGCGCTTGGTTGTTTCAGATATTGAGGAATACGTTCTTCACCCTTTACAAGCGCAAGGGGCGGGAGCCAGCCGTGATGGACCCGGATTTGCTGGATGCGATGCCGGCTGTGGGAACGGCGAGTGTGAGGAACCAGCGCCTGGCTGGGGCGCTGGACGGCACGGCGGGCCTGGACCTGGCGGCGGCCCTGGCTCGCCTGCCCGAAGAGTACCGTGCCGTGGTTCTCCTGGCGGACCTCGAGGATTTCACCATGGGGGAGATCGCGGCCATCATGGACTGCCCGGTGGGGACGGTGAAGTCTCGGCTCTTTCGGGCCCGGGGGATCCTGCGGGTGCTCCTCCGTGACTACGTGCAGTAG
PROTEIN sequence
Length: 176
MDHVKSELPAEALSHLDALYNLARWLARDPAEAEDLVQETYLRAIRAAHQFQPGTNLRAWLFQILRNTFFTLYKRKGREPAVMDPDLLDAMPAVGTASVRNQRLAGALDGTAGLDLAAALARLPEEYRAVVLLADLEDFTMGEIAAIMDCPVGTVKSRLFRARGILRVLLRDYVQ*