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PLM4_65_b1_redo_sep16_scaffold_121319_6

Organism: PLM4_65_b1_sep16_Methylomirabilis_oxyfera_65_27

near complete RP 53 / 55 BSCG 51 / 51 ASCG 10 / 38
Location: comp(4044..5402)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARS3_PELPD bin=16ft_combo_ws3_JS1 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 456.0
  • Bit_score: 449
  • Evalue 3.60e-123
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 450.0
  • Bit_score: 439
  • Evalue 8.00e-121
Tax=GWC2_Nitrospirae_57_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 456.0
  • Bit_score: 459
  • Evalue 3.70e-126

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Taxonomy

GWC2_Nitrospirae_57_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1359
GACCAGGAAGGAATCCGAACTCAGCTCCGGTGGGGGCTGAGCGATCGCTTCGAGGTCCGAGTCGCCGGAACGCCGGATGAAGCCCGTCAGGCAATACAGGCGGAGCGGTTTGATGCAGTGACGCTGGACCTCGGCCTGCCTCCTGACGCGGATGGGCCGACCGAGGGGCTCCGGCTCCTGGAGGAATTCCTGGCCCACGACCCCGCCACAAAGGTGGTAGTGCTCACCGGGAATACCGACCACGAGAATGCCATCCGAGCCGTCCAGATGGGCGCCTACGACTACTACCTGAAGCCGGTGAACGTGCCGGAGCTTGCCGTCATTCTGCAACGCGCCTGCCACCTCTCACTCCTGGACCGGGAGGCTTTCGGGAGAGAGGCGTCAGGCGTGCACGCCCCACCGACCGCGGAGATCATCGGCGAGAGCCCGGCCATGCTCCAGATCTTCGATACGATTCGGCGAGTCGCCAGGACCGACGTAACCGTCCTCATCAGTGGGGAGAGCGGCACCGGGAAGGAGCTGGTGGCACGGGCTATCCACTCCAAGAGCCCTCGCCGGCAGCGGCCCTTTGTGGCCATCAACTGTGGAGCCATCCCCGAGAATCTCGTCGAGAGCGAACTCTTCGGTCACGAGAAGGGCTCATTCACCGGGGCTCACACCCAGCGTAAAGGCCGCCTCGAAATGGCCGATGGCGGGACGGTGTTCCTGGACGAGGTCGCCGAGCTCCCCCTCCTTATCCAAGTCAAGCTCCTGCGATTCCTTCAAGAGCGGCAGCTTGAAAGGGTAGGCGGACGCGAAATGATCCCGTTGGACGTCCGGATACTAGCCGCCACTAACCGGGATATCAAGCGAGCCACCCTGGAGGGAAAGTTCCGCGAGGACTTGTACTACCGCCTGGTGGTCGTGAGCATTGAGATCCCGCCGCTTCAGAAGCGGCTGGAAGACATGCGGACGATGGCGCTCCACTTCCTGGAGCGAATTTCTGCGGACTACCGGGTGCCCGTCCGGCGGCTCTCAGCCGATGCCCTGGCGGCCATGGATGCCTACCAATGGCCGGGAAACGTCCGTGAGCTGGAGAATCGAATCAAGCGGGCCGTGATCATGGCGCAGGGGCGCAGGATCACGGCCGCAGACCTGGAGCTGCCTACTAAGGTCATGCCCGCATCCTTGGTGTCCTTGAAGGAGGCACGGAATGAAGTGGCGCGACGCGTTCTCGTGGAGGCGCTCGAGCGGTTTCGGGGGAATATCAGCCAAGTTGCCAAAGCAATCCAGATCAGCCGCCCAGCCCTCTATGAGCTAATGATCAAACATGGGATTCGCGCAGAAGACTTCAAGTCAGAAAAGAAGCCGGAGAGCTGA
PROTEIN sequence
Length: 453
DQEGIRTQLRWGLSDRFEVRVAGTPDEARQAIQAERFDAVTLDLGLPPDADGPTEGLRLLEEFLAHDPATKVVVLTGNTDHENAIRAVQMGAYDYYLKPVNVPELAVILQRACHLSLLDREAFGREASGVHAPPTAEIIGESPAMLQIFDTIRRVARTDVTVLISGESGTGKELVARAIHSKSPRRQRPFVAINCGAIPENLVESELFGHEKGSFTGAHTQRKGRLEMADGGTVFLDEVAELPLLIQVKLLRFLQERQLERVGGREMIPLDVRILAATNRDIKRATLEGKFREDLYYRLVVVSIEIPPLQKRLEDMRTMALHFLERISADYRVPVRRLSADALAAMDAYQWPGNVRELENRIKRAVIMAQGRRITAADLELPTKVMPASLVSLKEARNEVARRVLVEALERFRGNISQVAKAIQISRPALYELMIKHGIRAEDFKSEKKPES*