ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_3956_15

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(11862..13211)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-methylthioadenosine synthase-like protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 434.0
  • Bit_score: 432
  • Evalue 4.50e-118
MiaB-like tRNA modifying enzyme similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 429.0
  • Bit_score: 406
  • Evalue 5.70e-111
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 439.0
  • Bit_score: 605
  • Evalue 4.20e-170

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCGTATCGCCATCACAACTCTCGGTTGCAAGATCAACCAGTACGATTCTGCGGTGATTCAAAGCCGGCTGGGAGAGAATCACTCGTTCGTCCCTTTCGAAGACGAAGCAGATTGCTACGTCATCAATACCTGTACGGTGACCGACCGGGCCGATTGGGAGGCGCGCCAACTGGTGCGCCGGGCGAAGCGGCTGAATCCGGCGGCGCGTGTGCTGGTGACGGGTTGCTACGCGCAGGTAAATCCCGAGGAGGTTGCAGGAGTCGCCGGTGTCGATTACGTCGTTGGGCTCAACCGTTTGGATGATTTGCTGCGCTTCGTCGAAGCGCCTGCCGGCAACTTGACGCAAGTCGCGGTCAGCGACGTGAAGCGCGAGCGCGGCGTGCCGGTGCTTGGCACCAGGGCGCTGCCGGGTCACACGCGGGCTTTTCTAAAAATCCAGGAGGGTTGCAACTATACGTGCACTTACTGCATCATCCCAACGGCGCGCGGCTTAAGCCGGAGCGTGACGCCGCGCGAGGTCCTGGAGCAAGTGCGGCAGTTGGCCGAGGCGGGCTACAAAGAGATCGTCCTCACCGGCATCCATCTTGGCGGCTACGGTCAGGATCTCACTCCGAAAATCGATCTTACGGCGTTGTTGGAGATGATCGCCGAGAGCGGGCTCATTCCTCGTTTACGGCTGAGCTCTCTCGATCCGCGCGAGGTGCCGGACCGTTTGCTGGACGTGATCGCCGGTGCCGAAATCGTTTGCCCGCATGTACATATCTGCGCGCAAGCGGGCGATGATGAAATCCTCAAACAGATGCGACGCAACTACGACAAGGCCTATTATCGCGATCTGTTGCTGAGAGTGCGCGAACGTTTGCCGGATGCCGCTCTGGGTAGCGATATCATCGTCGGCTTCCCCGGCGAGACCGACGCGCAGTTCGAAAGCTCGCTGGAATTTTTCGACTCGGTGCCGCTCACTTATTTTCACGTGTTCCCTTATTCCTCGCGGCGCGGCACGGTGGCGGCCGCGCTATCGGACATGATTCCGGGCGCGGTGAAGAAGGCGCGCGCGCGGCGCATGCGCGAGTTGGGCGCGCGCAAGAAAAATGATTTTTGTTCGCGATTTGTTGGCCGAAATATGGACGTGCTGGTGGAAGAAAAGATCGACAAGGCTACCGGTCTGCAGCGAGGTTTCAGCCGTAATTACTTACCCGTTGCCGTCGCCGGTGAAAGCGCGCTTTCGAACCGAGAGTTAAAAGTGCGCATCGATGGCTTCCGCAACGGATGGCTGACGGGCCGATGGTCGCATGATGATGTCGCGGAGCTGATGCGCGACGAGGCGCTCGCCGGCCAACTCCAATAG
PROTEIN sequence
Length: 450
MRIAITTLGCKINQYDSAVIQSRLGENHSFVPFEDEADCYVINTCTVTDRADWEARQLVRRAKRLNPAARVLVTGCYAQVNPEEVAGVAGVDYVVGLNRLDDLLRFVEAPAGNLTQVAVSDVKRERGVPVLGTRALPGHTRAFLKIQEGCNYTCTYCIIPTARGLSRSVTPREVLEQVRQLAEAGYKEIVLTGIHLGGYGQDLTPKIDLTALLEMIAESGLIPRLRLSSLDPREVPDRLLDVIAGAEIVCPHVHICAQAGDDEILKQMRRNYDKAYYRDLLLRVRERLPDAALGSDIIVGFPGETDAQFESSLEFFDSVPLTYFHVFPYSSRRGTVAAALSDMIPGAVKKARARRMRELGARKKNDFCSRFVGRNMDVLVEEKIDKATGLQRGFSRNYLPVAVAGESALSNRELKVRIDGFRNGWLTGRWSHDDVAELMRDEALAGQLQ*