ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_33809_4

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 2942..3253

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 107.0
  • Bit_score: 175
  • Evalue 2.30e-41
rbpA; RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 107.0
  • Bit_score: 140
  • Evalue 1.80e-31
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 104.0
  • Bit_score: 186
  • Evalue 1.40e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGAGTACTAAATTATACGTAGGCGGTCTGCCCTATTCGGTAACCGAAGGGCGGCTGCAGGAAGTCTTTTCAGCGCACGGCACGGTCGAATCGGCCAACGTGATCTCGGATAAGTTTACCGGACAATCGCGGGGCTTCGGCTTCGTGGAAATGAGTTCGGGCGGCGAGGCGCAAAAGGCCATCGAGATGCTGCACGGCACCCAGCTTGACGGGCGCACGTTGACCGTCAATGAAGCTAAGCCGATGGCGCGGCGCGATAACGGCGGTGGCGGCGGTGGCGGAGGCCGCGACGGCGGGCGCAATCGCTGGTAG
PROTEIN sequence
Length: 104
MSTKLYVGGLPYSVTEGRLQEVFSAHGTVESANVISDKFTGQSRGFGFVEMSSGGEAQKAIEMLHGTQLDGRTLTVNEAKPMARRDNGGGGGGGGRDGGRNRW*