ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_38068_4

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(3647..4246)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate-requiring enzyme Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K106_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 194.0
  • Bit_score: 139
  • Evalue 2.00e-30
thiamine pyrophosphate-binding protein similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 194.0
  • Bit_score: 142
  • Evalue 8.90e-32
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 190.0
  • Bit_score: 182
  • Evalue 3.90e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGATCCGCTACGACTGCTTGAAACTGCTCGCGCCGCGGATTACCGACCAGCTGGTTGTCACTTCGCTCAGCGGGCAAAAGATCGAGTGGGCGAGTCTGTCACAGCACCCGGGTAATCTCCTAGTCGGCACCATGGGAACGGCGCTCGGCGTGGGCATCGGCCTGGCCATCGGTTTGCCCCGGCGCAAAGTTATTGTTTTGGAATCGGACGGCAGCGTGCTGCTCTCGCTGTTCAATCTGGCGACACTGGCTAATCTCGACCCGAAGAACTTGATCGTCTTGGTTTTCGATAACGAGGTGTACAGCGGCACGCGCATCAGCGAACCGACGGCCACGGCGGGCAAAACCGATCTGGCGATGATGGCGCGGGGAGCGGGCATCGAGCAGGCGACGACCGTCCGCGATCTGGAAACTTTCCAACGGGAAATGGACGGAGCGCTGGACGGGACTCAGCTCAAGTTTATCGTCTGCAAGGTCGAGGAGAGCGTTGCCCACCGGGAGATCACGCGCACCGATCTGGATCCCATGGAGAACAAGTATCAGTTTGTCCGTTATCTCGAACGAAGCGAAGGCAAACCGATCTTCCGCGGCCGAGGATGA
PROTEIN sequence
Length: 200
MIRYDCLKLLAPRITDQLVVTSLSGQKIEWASLSQHPGNLLVGTMGTALGVGIGLAIGLPRRKVIVLESDGSVLLSLFNLATLANLDPKNLIVLVFDNEVYSGTRISEPTATAGKTDLAMMARGAGIEQATTVRDLETFQREMDGALDGTQLKFIVCKVEESVAHREITRTDLDPMENKYQFVRYLERSEGKPIFRGRG*