ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_48234_2

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1784..3190

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-specific endopeptidase, M23 family bin=GWC2_Deltaproteobacteria_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 288.0
  • Bit_score: 264
  • Evalue 1.30e-67
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 351.0
  • Bit_score: 256
  • Evalue 7.60e-66
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 406.0
  • Bit_score: 414
  • Evalue 1.90e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGGTCTTCGAAACAACAGCTTCTGAAGCCGCCTTTAGGACTTGCACCGGAGTTTGGCGGGCTTCGTTTCCCAAACGCTTTTTCAATGCCTTCGTATGGCTGGTCACGGTCAGTTTCATTCTCGGAATGAAGCCATCGGAGGCCAACGCGGTTAAACAAAAGAATGTTCGGAAAGAAGTTTCCAAAGCCAAGGCAAAACCTGCCAGCGGCCCGGCTCACCAAGTAAAAGCTCCGGCGCGAAACGCGCTCTTGCGCCAACCGATCTTGCCGCCACTCGACCCGGACAGGCGAGAGTATGTGGTAGCAAAAGCTCGTTCCGGTGACACTATTGGCGCGATCTTAACCCGGTTCCAGATGCCCCAAGCTGAAAGATCGCTCTGGGAACGCTCGATTCGCAGGGACATCGGCAACCGTACCATCCCTCCTGGCAAAGACATCCATCTTTATTTCGCCAAAGCCGGTGCGGGCAGCCGGCAAGCGCCCAACGGACAACTCAAGGCAATCGAAATCGACGATAGCAACGAAGCCTTGGCGTTGACCTGGGAGAAAGGCATCAGGGGCATTCTTTTCCAGCGCCGCGAAAAGCCCTTCGATGTCGAGCTGAAAGCCGTCAGCGGGGTTGTCGAAAATTCGCTTTTCGAAGACGGGCGCAAGGCCGGCATCCATCCTGCGTTACTGTCGCAATTGACGGATATTTTCACCTGGGACATCGATCTGGAAAAAGATATACGCAAAGGCGACTCCTTCAAGATCCTTTACGAACAGCGCAGCCGGAAAGGCCAGGAGGCCAAACTAGGACTTAGAATTTTAGCCGCGGAGCTGATCAATGCCGGCAATAAGGTGACTGCGATTTACTTCGAGAAGCAAAAAGGCCAGGGCAACTATTTCAATTCCGAAGGCAGAAGCCTGGCCCGGTCGTTTCTGCGCTTTCCGCTGGAGTTTGCCGCCATCACCTCGCACTTTACCGATTCCCGTTTTCACCCTTTACTTAGAGCCAATCTTCCCCACACCGGCGTCGACTTTGCCGCCCAGCGCGGGACGCCGGTGCGCGCTGTCGGCGACGGCGTGATTGTCGAAGCGGGTTGGAACGGCGGTTACGGTAAAGCCATCGACATCAAGCATGACGCCGCCTACATGAGCCGTTACGCCCACCTTGACCGCTTCGCCGAGGGCATTAAGCCCGGTACAGCAGTAATCAAAGGCCAGCTCATCGGTTACGTCGGCTCCACCGGCAGGTCTACCGGTCCCCATCTTCATTTTGAGCTCTACAAAGATCAGCAGTACGTCAATCCCCTGAGTGTCGATTTCCCGGCGGATGAAACCATCGAGCCGGACTTGCAGAAGCGGTTCGAAAACCAGATGAAAACTTACCTGGTCGAACTGAGCGGCAGCGCGCCTCAATCCTAG
PROTEIN sequence
Length: 469
MVFETTASEAAFRTCTGVWRASFPKRFFNAFVWLVTVSFILGMKPSEANAVKQKNVRKEVSKAKAKPASGPAHQVKAPARNALLRQPILPPLDPDRREYVVAKARSGDTIGAILTRFQMPQAERSLWERSIRRDIGNRTIPPGKDIHLYFAKAGAGSRQAPNGQLKAIEIDDSNEALALTWEKGIRGILFQRREKPFDVELKAVSGVVENSLFEDGRKAGIHPALLSQLTDIFTWDIDLEKDIRKGDSFKILYEQRSRKGQEAKLGLRILAAELINAGNKVTAIYFEKQKGQGNYFNSEGRSLARSFLRFPLEFAAITSHFTDSRFHPLLRANLPHTGVDFAAQRGTPVRAVGDGVIVEAGWNGGYGKAIDIKHDAAYMSRYAHLDRFAEGIKPGTAVIKGQLIGYVGSTGRSTGPHLHFELYKDQQYVNPLSVDFPADETIEPDLQKRFENQMKTYLVELSGSAPQS*