ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_65_b1_redo_sep16_scaffold_57552_3

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 2469..3743

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein 1A Tax=Pandoraea sp. RB-44 RepID=V5UGQ0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 424.0
  • Bit_score: 447
  • Evalue 9.80e-123
penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 424.0
  • Bit_score: 447
  • Evalue 2.80e-123
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 412.0
  • Bit_score: 546
  • Evalue 2.20e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
GTGGCTGAAAACTCACCGCTTCCCGGACGGGTTACGCGCTTTTACCAGTTGCTCGCGGGCTACTTCCGCCGTGTCACCGATCCAGCCTTGAGTACGCGGGTCAGGATTATTTCCGGTACTAAGGGACTGGCCGTGTTGGGCGCGCTCGGACTCGTGCTGTTATGTGTCTACGCTGTCATTTTGATCCCGTTCACGCCTAGTATTTCCGATATACGAAAAGCCAACATCGACCAGCCCAGCGTGTTGATTTCCGCCGACGGTAAGCGTCTGGCGACGTTTAAGCCGATGAACCGCGAGTGGGTCCGCTTAAATCAAATCTCTGCGCATGTGATCAATGCCCTGATCGCCACGGAAGATCACCGCTTTTATCAGCACTTCGGCGTCGATTTGTGGCGCACGGCGACGGGCTTCGCGCGTTTCTTTATCGGCAATCCCGAGGGCGGATCCACCTTGACCCAGCAACTCGCGCGCAACCTGTATCCGCAGGAAGTCGGCCGGAAGCGGACGGTCACGCGCAAAATAAAAGAGACGATCACCGCGATCAAAATCGAATACGCCTACACAAAAAGAGAAATACTGGAAACCTATCTCAATACGATGCCGTTCTTGTACAACGCCTTCGGCATCGAGATGGCGGCGCGCACCTACTTCGACAAATCGGCGCAAAAACTCAGTGTCCTTGAAAGCGCAACCTTGATCGCCATGTTGAAAGGCACCAGCTATTACAACCCTGTGCTCAATCCTGCGCGCGCGCTTCAGCGCCGTAACGTGGTGCTGTCGCAAATGCTCAAGCGCGGGGTGCTGAGCCAGGCCGATTTCGACAGGCTAAAAGCCCGGCCGATACGCCTGGATTTCGAGCGCCAGCCGGAAGCTGTCGGACCTGCCCCTCATCTTGCCGCGCACATTCGTAAATGGCTGATCGATTGGGCGGACCGTAACGACCGCGACATTTACTCCGACGGGTTGATCGTGCACACGACCATCGACTCGCGCTTGCAGGCGGTGGCGAACCAAGCCGTAAACCGCCAGATGGAGGCCCTGCAGGCGGTGGCCGACGTAGAGTGGGGACTGATCTCCGAAGGATTGCTATCGTCGAGCGCGAACGCGTACGTCGATCAGCGCCGGCGCGTGCAGCCTTTCGGCTATTTTTGGAAAACCAAGCCGGGCTTGATTGACACGTTCATTCGAGAATCCGCGGCTTATCGCAGCGCGATCGATGCCGGCGCTGCGCCCGAAGCCGCGCTGGAGCAATTGAAGAACAACCGCGAGTTCATG
PROTEIN sequence
Length: 425
VAENSPLPGRVTRFYQLLAGYFRRVTDPALSTRVRIISGTKGLAVLGALGLVLLCVYAVILIPFTPSISDIRKANIDQPSVLISADGKRLATFKPMNREWVRLNQISAHVINALIATEDHRFYQHFGVDLWRTATGFARFFIGNPEGGSTLTQQLARNLYPQEVGRKRTVTRKIKETITAIKIEYAYTKREILETYLNTMPFLYNAFGIEMAARTYFDKSAQKLSVLESATLIAMLKGTSYYNPVLNPARALQRRNVVLSQMLKRGVLSQADFDRLKARPIRLDFERQPEAVGPAPHLAAHIRKWLIDWADRNDRDIYSDGLIVHTTIDSRLQAVANQAVNRQMEALQAVADVEWGLISEGLLSSSANAYVDQRRRVQPFGYFWKTKPGLIDTFIRESAAYRSAIDAGAAPEAALEQLKNNREFM