ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_73778_2

Organism: PLM4_65_b1_sep16_Deltaproteobacteria_57_7

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(143..1147)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. BT03 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 330.0
  • Bit_score: 377
  • Evalue 7.50e-102
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 22.2
  • Coverage: 270.0
  • Bit_score: 61
  • Evalue 3.40e-07
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 323.0
  • Bit_score: 407
  • Evalue 1.20e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAAACACTACCGAACGAATCCCGTGGAGTTGGTTCTTGTAGCTTTCTTCCTTCTTACTGCCCATGCGCTGGACGCAGGTGCCGCGGTGCCGATGAACCAGCTAGTCATCACGTTCGGCAGTCTCAGCGAACGCGAAACTGCTCTCTTTGTCGCTAAAGATTATGGCATTTTCGCCAAGCATGGGTTGGACGTGCGGCCGGTACATGTAAGCAACGGCGCCGTTGCTTTGTCGGCACTGGTTAGCGGTGACGCGCAATTTTACATGGGAGCTGCGACGGGTTCGACGCTTGGTGCGATTGCCAACGGGATGGACGCGGTGTTTGTGACCAGCTTGATCCATAAACTGGAAGGCACCTTTGTCGTTAACCCCAGCATAAAAAGTCCATCGGAGCTGAAAGGAAAAACCATCGGCGTTACAAGCATCGGCGGTGGAGTCTGGATGCGCTCCATGTTGACCTTTGAGCACTGGGGTCTGGAGCCGCAAAGAGACAAAATCAACTTGCGGGTCGTAGGCGATGAATCGCTCCTAGCTCAGGCCATGCCAAATCGTATCATCGAGGGGGCGTATTTTAACTACACTTTCGCGTCGGTGCTCGAACGCCAGGGCTTTCGCGTGCTTGCCGATCTCGCCAAGCTCAATATCCCGTATCAGAATACGGCGCTCTTGGCGCAACGGAAGTTTCTGAGTTCCGCCCCGGATGCTACGGAGAGACTACTCAGAGCGATGTCGGATGCTGTCTTATTCGTCCTCGAGCCGAAGAACAAATCGCTCGTGCTAAAAAGCATAGCCAAGGGGCTTCGTCTGCCGCGCCCTGAAGATGCGGCGGCAGGTTACGAGCGGCTTGGCAATATGTATCAGCGCCGGATCTTTCCCAACGTCGAAGGTATTCGCTCGACGATTCGCTTTCTCGGCCCCACCAACGAGAAAATTCGCGCCTTGAAGGCAGAAGATCTAGTCGACGAAAGATTCGTCAAGAAATTGGAACACGAGGGACGGTTCTAG
PROTEIN sequence
Length: 335
MKHYRTNPVELVLVAFFLLTAHALDAGAAVPMNQLVITFGSLSERETALFVAKDYGIFAKHGLDVRPVHVSNGAVALSALVSGDAQFYMGAATGSTLGAIANGMDAVFVTSLIHKLEGTFVVNPSIKSPSELKGKTIGVTSIGGGVWMRSMLTFEHWGLEPQRDKINLRVVGDESLLAQAMPNRIIEGAYFNYTFASVLERQGFRVLADLAKLNIPYQNTALLAQRKFLSSAPDATERLLRAMSDAVLFVLEPKNKSLVLKSIAKGLRLPRPEDAAAGYERLGNMYQRRIFPNVEGIRSTIRFLGPTNEKIRALKAEDLVDERFVKKLEHEGRF*