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PLM4_65_b1_redo_sep16_scaffold_26935_3

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: comp(1409..2614)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein Tax=Holophaga foetida DSM 6591 RepID=H1P2J2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 396.0
  • Bit_score: 474
  • Evalue 7.00e-131
Pilus assembly protein PilC {ECO:0000313|EMBL:KDA54490.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 403.0
  • Bit_score: 495
  • Evalue 7.10e-137
pilC; type IV pilus inner membrane protein PilC similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 399.0
  • Bit_score: 426
  • Evalue 8.10e-117

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Taxonomy

Thermoanaerobaculum aquaticum → Thermoanaerobaculum → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCCAACTTCATCTGGAAGGGAAAGAACCGCTTCGGCGCATTTCAGGAGGGCGTCCTGATCGCCGATACCCGCGACGCAGCGACTGCCATTCTGCGCCGCCAGAACGTGCAGATCACTTCGATCAGGGAGAAGGGCCGGGAGCTCCGGCTTCTTCCCAAGTTTTCACTGGGGGTCGCCCCCAAGCGAGTGGCGATCTTCACCCGCCAGTTCTCGGTGATGCTCGACGCCGGTCTGCCTCTCGTGCAATGCCTTGAGATTCTCGGCGAGCAGGAAGAGAGCCGGTCTTTCCGCGAGATCATTCAGCAGGTACGCTCGGACGGGGAGTCAGGCTCCAACCTCGCCGATGCCATGGCCAAGCATCCGAAGGCCTTCAACAAGCTCTACTTCTCGATGATCGCGGCCGGCGAGGCCGGCGGTATCCTGGACGTCATCCTGCAGCGACTCGCAACCTACATCGAGAAGGTCGTGCGGTTGAACTCACAGGTCAAGGCGGCGCTGATCTACCCGGTCTCCATCATCGTGATCGCGGCCGGAGTCGTGGCGATCATTCTCTGGAAGGTGATCCCGGTGTTCGCCCAGCTGTTCGCCGGTCTCGGCGGAGAGCTTCCCTTCCTGACGCGAGCGGTGGTCGGCGCGAGCAATTTCCTCGCCCGGTTCTTCCTGTTGATCGTCATCGCCATCGGGCTGATCATCGCGGCGGTCCGCAAGTACCACAAGACGGAACGCGGAAGAAGGGTCATCGACGGCTTGATGCTCAAGCTTCCGGTCGTCGGAATGATCGTGCGAAAGATCGCGGTGGCGCGTTTCTGCAGGACTCTCGCCACACTGACTTCTTCGGGCGTGCCGATTCTCGATGGTCTCGAAATCACCGCCAAGACCTCGGGAAACGCCATCGTCGAAGACGCCATCATGGCCGTCCGCAAGAGCGTCGAAGAGGGCAAGACCATCTCCGGACCCCTGGCGGAGACCGGGGTTTTTCCGCCCATGGTCGTCCAGATGGTCAACGTCGGCGAGCAGACCGGCGCCCTCGATCAGATGTTGTCGAAGATCGCCGATTTCTACGAGGAGGAAGTGGACACCGCGGTGGCTGGACTGATGAAGCTCCTCGAACCGCTCATGATCGTCGTCCTCGGCGGCGTCATCGGCACCATCGTCACGGCCATGTACATGCCTATGTACGCGATCCTGCAGAAGATCGAATAG
PROTEIN sequence
Length: 402
MPNFIWKGKNRFGAFQEGVLIADTRDAATAILRRQNVQITSIREKGRELRLLPKFSLGVAPKRVAIFTRQFSVMLDAGLPLVQCLEILGEQEESRSFREIIQQVRSDGESGSNLADAMAKHPKAFNKLYFSMIAAGEAGGILDVILQRLATYIEKVVRLNSQVKAALIYPVSIIVIAAGVVAIILWKVIPVFAQLFAGLGGELPFLTRAVVGASNFLARFFLLIVIAIGLIIAAVRKYHKTERGRRVIDGLMLKLPVVGMIVRKIAVARFCRTLATLTSSGVPILDGLEITAKTSGNAIVEDAIMAVRKSVEEGKTISGPLAETGVFPPMVVQMVNVGEQTGALDQMLSKIADFYEEEVDTAVAGLMKLLEPLMIVVLGGVIGTIVTAMYMPMYAILQKIE*