ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_4079_3

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: 2709..3683

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Y6_PEDSD bin=16ft_combo_ws3_JS1 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 227.0
  • Bit_score: 149
  • Evalue 3.20e-33
photosynthetic reaction centre cytochrome c subunit similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 216.0
  • Bit_score: 245
  • Evalue 2.10e-62
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:AHG88272.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 216.0
  • Bit_score: 245
  • Evalue 1.00e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 975
ATGCCATGCGCCCGACTCGCCCTGCTCACCGCCGGGCTCGCCATCTCCCTCCCCGCGACTTCCACGGCCCAGTGGCCCCCCGAGAAGCTCGAGAACCTGAAAGTCCTGCCGGATACCATGCCGGTCCGCCAGCTGATCGACCTCATGGCCGGCTTCACCCGCGCCCTCGGGGTCCGCTGCACCCACTGCCACGTGGGCGAGGAGAACCAGCCGCTCGAGACCTACGACTTCCCCTCGGACGAGAAGCCGGCCAAGCGCAAGGCCCGGGAAATGCTCCGGATGGTCCAGGCCATCAACGGCGAGCACCTCACCGGCCTCGAGGAACGACAGGACCCGCCCGTCCAGGTGCAGTGCATCACCTGCCACCACGGCGTCACCGCCCCCCGGACCCTCCAGGACGTCCTGCTGCTGGCCTACCAGGCGGGCGGCCTGGACTCGACCCTCACGACCTACAACGCCCTCCGGCGGCGCTACTACGGGAGCGCGGCCTACGACTTTGGCGAGGTGCCGCTCACCGACGTGGCCGGCACGGTCGCGCGGCGCGGCCGGCTGGATGACGCCGTGCGGCTCCACGCGCTCAACGTGGAGCAGAACCCCGAGTCCCGGTTCGCCAAACAGCAGCACGGCCGGATCGCCCTGCTCCAGGCCTTCACCACCCTGGGCCCGGATTCCGGCCTGGCCCGCTACCAGACCCTCCGTGCGCAATACGGCCCGGCCGCCTTCCCCGAGTTCGCGCTCAACGACCTGGGCTACGCGCTGCTCGGCCGGAACAAGACCGCCGAGGCGATCGCGGTGTTCCGCCTCAACGTCGAGGGGTTCCCGCGGTCGGCCAACGCCCACGACAGCCTGGGCGAGGCCTACGCCGCCGCCGGCGACACCACCCGCGCCATCGCCAGCTACCAGCGGTCGCTCGAGCTGGACTCGACCAACGCCAACGCGACCAAACGGCTGGACGCGCTCCGCGCTCGACGCTAG
PROTEIN sequence
Length: 325
MPCARLALLTAGLAISLPATSTAQWPPEKLENLKVLPDTMPVRQLIDLMAGFTRALGVRCTHCHVGEENQPLETYDFPSDEKPAKRKAREMLRMVQAINGEHLTGLEERQDPPVQVQCITCHHGVTAPRTLQDVLLLAYQAGGLDSTLTTYNALRRRYYGSAAYDFGEVPLTDVAGTVARRGRLDDAVRLHALNVEQNPESRFAKQQHGRIALLQAFTTLGPDSGLARYQTLRAQYGPAAFPEFALNDLGYALLGRNKTAEAIAVFRLNVEGFPRSANAHDSLGEAYAAAGDTTRAIASYQRSLELDSTNANATKRLDALRARR*