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PLM4_65_b1_redo_sep16_scaffold_4732_4

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: comp(3282..4607)

Top 3 Functional Annotations

Value Algorithm Source
Putative outer membrane macrolide efflux protein Tax=Myxococcus RepID=Q1D4Q0_MYXXD bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 441.0
  • Bit_score: 333
  • Evalue 2.10e-88
outer membrane macrolide efflux protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 440.0
  • Bit_score: 280
  • Evalue 4.60e-73
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 449.0
  • Bit_score: 432
  • Evalue 6.20e-118

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1326
GTGACAAATAGCCATTCCCGCGCGGCCGGGCTCGCCCTGCTGCTCGCGCTGGTTCCGGGCGGCGCCGCCGCCCAGGACGTGACCGTCACGCTGGCCGACGCGGTCGAGCTGGCGCTCCGCGCCCAGCCGGCGGTGGTGCAGGCGCGAGGAAACGTCGACGTCGCCCACGCGGGTCGCCGTGAGGTGATCGGCTCCTGGTTGCCGCGCCTCACCAGCTCGGGCAGCTACACCGCCCAGCCGACCTCCCGCTGGAGCAACGACCTGCAGCAGTTCGTGAGCGGCGGCTCGAGCACGTCGCAGTCCGCGGGCTTCTCGGCGTCGCTCGAGCTGTTCGACGGCTTTCGGCGGCTGGCGCAGGGCCGGGCCGCGGGCGCCGAGCTCGCCAGCGCCGACGCCAACCTGACCAATCAGCAGTTCCAGGTCTCGCTCCAGGTGAAGCAGACCTTCTTCAGCGCGCTGGCCGCCGACGAGCTGGTCCGCGTGGCCGCCACGCGCATCCAGCGGGCCGAGGAGCAGCTCAAGGTGGCGACCGAGAAGCTGCTGGCGGGCAGTGCCACCCGCTCGGACACGCTCCGGAGCGCGGTGGAGATGGGCAACGCCCGCCTCGCGCTCCTCACCGCCGAGACCCAGCAGGCCACCGCGCGGGCGGAGCTGGCCCGGCTGATCGGCGTGGACCGTCCGGTCCGCGCCCTCCCCGATTCGACCCTCTTCCGGATGACGGCGCTGGACACCGCCGCGCTCCGGGTCGAGCTGCTGCGCACGGCCCCCGCGGTGCTGGCCGCGGAGGCCGACGCCCGGTCGGCCGCCGCGACGGTGGGGGTGAACCGCGCCCAGTATTTCCCCACCATCACCGGCTCGTTCTCGCAGAACTGGTCGGGTCCCGTGACCACCGGAACCGATCCGGTGACCGGCGACCCGAACAGCATCACGTGGCGCGGCCAGTGGTCGGCCCGGTTGTCGCTCAGCTGGAGCATCTTCAACGGATTCACCCGCGAGGCGGGGCTCACCCGGAGCACCGTGGCGCGGGAGACCGCCGAGGCGCAGGCGGCCGATGCCCGGCGCCAGGCGTCGGCGCAGCTCACCCAGCAGTTGGCCGCCTTTCAGTCGGCCCAGACGCGGATCACGATCACCGTGGCCAGTCGGGCGGCGGCCGACGAAGACCTGCGGGTAGTGCGGGAGCGCTACCGGCTGGGCGCGGCCACCATCCTCGAAGTGCTGACGTCGCAGGTGACGCTGGACCAGGCGGAGGTGGACGCGATCCAGGCCCAGTTCGACTTCCTGGTGGCCCGGGCCCAGCTCGAGGCGTTGCTCGGGAGGACCCTGTGA
PROTEIN sequence
Length: 442
VTNSHSRAAGLALLLALVPGGAAAQDVTVTLADAVELALRAQPAVVQARGNVDVAHAGRREVIGSWLPRLTSSGSYTAQPTSRWSNDLQQFVSGGSSTSQSAGFSASLELFDGFRRLAQGRAAGAELASADANLTNQQFQVSLQVKQTFFSALAADELVRVAATRIQRAEEQLKVATEKLLAGSATRSDTLRSAVEMGNARLALLTAETQQATARAELARLIGVDRPVRALPDSTLFRMTALDTAALRVELLRTAPAVLAAEADARSAAATVGVNRAQYFPTITGSFSQNWSGPVTTGTDPVTGDPNSITWRGQWSARLSLSWSIFNGFTREAGLTRSTVARETAEAQAADARRQASAQLTQQLAAFQSAQTRITITVASRAAADEDLRVVRERYRLGAATILEVLTSQVTLDQAEVDAIQAQFDFLVARAQLEALLGRTL*