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PLM4_65_b1_redo_sep16_scaffold_4732_7

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: comp(5413..5979)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 177.0
  • Bit_score: 156
  • Evalue 1.50e-35
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 177.0
  • Bit_score: 156
  • Evalue 4.30e-36
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 180.0
  • Bit_score: 235
  • Evalue 3.60e-59

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGCGTAACCAAGAAGAGACGGACGCCGAGTTGGCCGTGCGGGCCCAGGCCGGCGACCGGGAGGCGTTCGGCGCGTTGGTGATGCGATACTCGCCCCAGGCCCGACGCATGGCGCGCGTGGTGCTGAGCGATCCGGAAGACGCCGACGACGCGGCGCAGGACGGTTTTCTCGCCGCGTTGCGGCACATCGGGCGGTACGACGCGGGCCGGCCCTTCGGCCCCTGGCTCCTTCGGATCGTGGCCAACGCGGCGGCCGACCGCCGGCGCCGGCTGAAGGTGCGCCGCACCGAAGAGCTGTCGCCGCAGGTCGCGTCCCGCACGGCCGATCCGGCCGAGGTGACGGACCGGCGGGGGTTGCGAGAGGCTTTCACGGCGGCGCTGGGCCGGCTGCCGGAGCGACAGCGCATCGCGGTGGTGTTGTTCGACGTCGAGGGATACAGCCACGGCGAGATCGCCGCGGTGCTGGGGATCCCGGAAGGGACCGTGCGGTCGGACGTGTTCCACGCCCGCCGCGCGCTCCGCGAGCCGCTGGCGGCGTGGAGATCGTGGAAGGAGAAGGAGAAATGA
PROTEIN sequence
Length: 189
MRNQEETDAELAVRAQAGDREAFGALVMRYSPQARRMARVVLSDPEDADDAAQDGFLAALRHIGRYDAGRPFGPWLLRIVANAAADRRRRLKVRRTEELSPQVASRTADPAEVTDRRGLREAFTAALGRLPERQRIAVVLFDVEGYSHGEIAAVLGIPEGTVRSDVFHARRALREPLAAWRSWKEKEK*